DRSC/TRiP Functional Genomics Resources

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Protein Alignment AgaP_AGAP002028 and C18B12.4

DIOPT Version :9

Sequence 1:XP_321026.4 Gene:AgaP_AGAP002028 / 1281089 VectorBaseID:AGAP002028 Length:615 Species:Anopheles gambiae
Sequence 2:NP_510498.1 Gene:C18B12.4 / 181600 WormBaseID:WBGene00007666 Length:456 Species:Caenorhabditis elegans


Alignment Length:386 Identity:105/386 - (27%)
Similarity:166/386 - (43%) Gaps:68/386 - (17%)


- Green bases have known domain annotations that are detailed below.


Mosquito    78 FGGEIPDSGLKVLADR-------ADPPDGCTEMRPAPNITSK----FAVVIARYN----CSFEVK 127
            ||.::.|.   ::::.       .:|.|.|..:|.|.|.|::    ||.| :|.|    |.|..:
 Worm    53 FGMDVSDF---IISEENLGCGVGVEPVDACGPVRIAQNHTTRCHNLFAFV-SRSNISHPCKFSHQ 113

Mosquito   128 VRNAQQAGY--AMVIVHNVGSNDLEHMSANHPQDLL-IPSVFVGESAGRSIIEAYLYDHDYALVI 189
            ....|.:.|  .:||.:|....:...|.....:|.: ||.:.:..:....|.:.:.....|.|.:
 Worm   114 AFMVQNSTYPFRLVIFYNYPGQEPISMEGTELRDKVNIPVLMISHACKEEIAKKFSDTAGYRLRV 178

Mosquito   190 TDDIPFNISNNLIIPFAIVVGLCFIIMVLFMIIRCIR---ERRRRMRHRLPARVLRKIGIVKFAK 251
            ..|..:......:|||.:|:..||   .||:|..|:|   |||:..:.||..|.|:||.:.|:..
 Worm   179 RIDPGYYELFRYLIPFLVVIVFCF---ALFLITLCVRGCVERRKLNKRRLSKRNLKKIPVKKYRL 240

Mosquito   252 GMRFDTCAICLEDFVENERLRVLPCRHAYHAICIDPWLTKNRRVCPICKRRVIVRGEARQRRYSS 316
            |...||||||||.|...|:||.|||||.:|..|||.|||:.|::||:|||::   |.......|:
 Worm   241 GDDPDTCAICLESFASGEKLRHLPCRHVFHCNCIDVWLTQTRKICPLCKRKI---GTDSDSECST 302

Mosquito   317 DSMSSTN--ADESTPLLNSTE--------------------------------NSTSGSAAGVVT 347
            :.::||:  .:::|.|.|:.:                                |:|..|..|.|.
 Worm   303 NDLASTSQGPNDATALYNNADNQSGFELPVPQGQMVDLWSSQEALVDQDIVLHNTTRRSITGFVR 367

Mosquito   348 APPATSSSSPVTAAVAPSGNSGAGAQTAAAAAPQRDQQQLQQNAAPD---SHVMEVPPSDD 405
            .......:||....|........|:..........|...|.:|...|   |..:.:|.|::
 Worm   368 NAFRKLRNSPRHRDVDVHSGLEGGSYLVRQQTTSNDNDHLLENEVSDPTSSSELNIPSSEE 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AgaP_AGAP002028XP_321026.4 PA_C_RZF_like 51..197 CDD:239038 30/136 (22%)
zf-RING_2 256..300 CDD:290367 27/43 (63%)
C18B12.4NP_510498.1 PA <74..176 CDD:333703 25/102 (25%)
HRD1 <223..>335 CDD:227568 45/114 (39%)
RING-H2_RNF103 246..291 CDD:319387 28/44 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 76 1.000 Domainoid score I5871
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001489
OrthoInspector 1 1.000 - - oto35506
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X670
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.770

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