DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43165 and col28a1a

DIOPT Version :10

Sequence 1:NP_001245858.1 Gene:CG43165 / 12798550 FlyBaseID:FBgn0262721 Length:95 Species:Drosophila melanogaster
Sequence 2:NP_001334976.1 Gene:col28a1a / 555428 ZFINID:ZDB-GENE-070705-84 Length:1170 Species:Danio rerio


Alignment Length:61 Identity:24/61 - (39%)
Similarity:27/61 - (44%) Gaps:5/61 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LKDPICGQPPAVNGNDFIKCAGSFEKFSYYPHINVCQKFEYGGCFGNDNSFNTLEKCHKKC 80
            ||...|||     |.|...|......:.|.|..|.|.:|.||||.||.|.|.|.:.|...|
Zfish  1112 LKHVGCGQ-----GLDPGPCREYSVMWYYDPQANACAQFWYGGCQGNSNRFETEDICKSTC 1167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43165NP_001245858.1 Kunitz-type 24..80 CDD:444694 21/55 (38%)
col28a1aNP_001334976.1 vWFA_subfamily_ECM 49..214 CDD:238727
gly_rich_SclB <246..>551 CDD:468478
gly_rich_SclB <482..>766 CDD:468478
VWA 802..980 CDD:459670
Kunitz_collagen_alpha1_XXVIII 1117..1167 CDD:438671 21/54 (39%)
Blue background indicates that the domain is not in the aligned region.

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