DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43165 and col28a1b

DIOPT Version :10

Sequence 1:NP_001245858.1 Gene:CG43165 / 12798550 FlyBaseID:FBgn0262721 Length:95 Species:Drosophila melanogaster
Sequence 2:NP_001289178.1 Gene:col28a1b / 100332225 ZFINID:ZDB-GENE-160503-1 Length:1109 Species:Danio rerio


Alignment Length:65 Identity:20/65 - (30%)
Similarity:27/65 - (41%) Gaps:12/65 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PPAVNGNDFI------------KCAGSFEKFSYYPHINVCQKFEYGGCFGNDNSFNTLEKCHKKC 80
            ||.:...||.            .|.....|:.:.|..|.|.:|.:|||.||.|.|::...|.|.|
Zfish  1042 PPLIFQQDFTADERCLQPLDPGPCREYVVKWYFDPKANSCAQFWFGGCKGNKNQFDSELTCRKTC 1106

  Fly    81  80
            Zfish  1107  1106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43165NP_001245858.1 Kunitz-type 24..80 CDD:444694 19/63 (30%)
col28a1bNP_001289178.1 VWA 45..226 CDD:459670
gly_rich_SclB <243..>313 CDD:468478
gly_rich_SclB <291..>568 CDD:468478
gly_rich_SclB <491..>773 CDD:468478
vWFA 797..987 CDD:469594
Kunitz_collagen_alpha1_XXVIII 1056..1106 CDD:438671 15/49 (31%)
Blue background indicates that the domain is not in the aligned region.

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