DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43218 and CG42397

DIOPT Version :9

Sequence 1:NP_001246864.1 Gene:CG43218 / 12798438 FlyBaseID:FBgn0262854 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001163428.1 Gene:CG42397 / 8673976 FlyBaseID:FBgn0259748 Length:178 Species:Drosophila melanogaster


Alignment Length:89 Identity:27/89 - (30%)
Similarity:42/89 - (47%) Gaps:18/89 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 GTCSANSTVPPPVTTTTTTAAPE-------TIPPTPSGPCDNDVTCQLQEKSIPHPTHCRNFYTC 145
            |:.|:.......:||..:|...:       |:||        .|.|..::..:|.| .||.:|.|
  Fly    19 GSTSSGEDTNIKLTTDESTTVEDTTEVLVTTLPP--------PVLCADEDLFLPAP-DCREYYQC 74

  Fly   146 -YGKCAVLGLCELGKWFDREGNVC 168
             ||: .:|.:|..|.::|||.|||
  Fly    75 LYGE-GILKICPDGLYWDRELNVC 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43218NP_001246864.1 CBM_14 34..79 CDD:279884
CBM_14 133..177 CDD:279884 17/37 (46%)
CG42397NP_001163428.1 CBM_14 58..102 CDD:279884 17/42 (40%)
ChtBD2 125..163 CDD:214696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000799
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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