DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43218 and obst-B

DIOPT Version :10

Sequence 1:NP_001246864.1 Gene:CG43218 / 12798438 FlyBaseID:FBgn0262854 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_609339.1 Gene:obst-B / 34336 FlyBaseID:FBgn0027600 Length:337 Species:Drosophila melanogaster


Alignment Length:195 Identity:47/195 - (24%)
Similarity:67/195 - (34%) Gaps:63/195 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 NDLVPDCEDCSGYYICGDGSYEKVKCPQGLIF----------DIALNTCVLGQ-----------C 83
            |...||.:.|..||.|.||...:..|..|::|          |:..|...:.:           |
  Fly    90 NGFYPDSKQCDKYYACLDGVPTERLCADGMVFNDYSPIEEKCDLPYNIDCMKRSKLQTPQPSLHC 154

  Fly    84 PRFDG------------------------TCSANSTVPPPVTTTTTTAAPETIPPTPSGPCDN-- 122
            ||.:|                        ||.|.....|   .|.....|:.:..|   .|.:  
  Fly   155 PRKNGYFGHEKPGICDKFYFCVDGQFNMITCPAGLVFNP---KTGICGWPDQVGVT---GCKSED 213

  Fly   123 --DVTCQLQEKSI--PHPTH-----CRNFYTCY-GKCAVLGLCELGKWFDREGNVCNYSHKVTNC 177
              |..|....:||  .||.:     |:.||.|. |.......|:||:.||.|...|:::.||.:|
  Fly   214 VFDFECPKVNESIAVTHPRYADPNDCQFFYVCVNGDLPRRNGCKLGQVFDEEKETCDWARKVPDC 278

  Fly   178  177
              Fly   279  278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43218NP_001246864.1 CBM_14 34..79 CDD:426342 14/48 (29%)
CBM_14 134..177 CDD:426342 16/48 (33%)
obst-BNP_609339.1 CBM_14 89..139 CDD:426342 14/48 (29%)
CBM_14 156..204 CDD:426342 8/50 (16%)
CBM_14 233..278 CDD:426342 14/44 (32%)

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