DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43218 and Peritrophin-A

DIOPT Version :10

Sequence 1:NP_001246864.1 Gene:CG43218 / 12798438 FlyBaseID:FBgn0262854 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_523418.1 Gene:Peritrophin-A / 33023 FlyBaseID:FBgn0022770 Length:230 Species:Drosophila melanogaster


Alignment Length:191 Identity:38/191 - (19%)
Similarity:59/191 - (30%) Gaps:67/191 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EIC-------ICSGHLVNDLVPDC------------EDCSGYYICGDGSYEKVKCPQGLIFD--- 72
            ::|       |..||.:....|:|            |:|..:::|.:|:.....|..||:||   
  Fly     5 QVCSVLILAWIACGHALAVGSPECPEKYGVQAYAHTENCDQFFLCTNGTLTLETCENGLLFDGKG 69

  Fly    73 IALNTCVLGQCPRFDGTCSANSTVPPPVTTTTTTAAPETIPPTPSGPCDNDVTCQLQEKSIPHPT 137
            ...|.|..    .:...|......|.|::|.                     .|:.|........
  Fly    70 AVHNHCNY----NWAVDCKGRQWDPTPISTP---------------------ACEYQFGLYAVSK 109

  Fly   138 HCRNFYTCYGKCAVLGL-----CELGKWFDREGNVCNYSHKVT-----------NCPANQD 182
            .|.   |.|.||| .|.     |:.|..:|...:.||:..::.           .||...|
  Fly   110 DCS---TTYIKCA-HGEPHEQDCDAGLAYDERIHGCNWPDQLLEHCNPEAVVGFKCPTKVD 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43218NP_001246864.1 CBM_14 34..79 CDD:426342 14/59 (24%)
CBM_14 134..177 CDD:426342 12/58 (21%)
Peritrophin-ANP_523418.1 CBM_14 36..83 CDD:426342 11/50 (22%)
CBM_14 103..147 CDD:426342 12/47 (26%)
ChtBD2 179..218 CDD:214696
Blue background indicates that the domain is not in the aligned region.

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