DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43336 and Tmprss11c

DIOPT Version :10

Sequence 1:NP_001247122.1 Gene:CG43336 / 12798414 FlyBaseID:FBgn0263041 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001399454.1 Gene:Tmprss11c / 408213 RGDID:1302967 Length:431 Species:Rattus norvegicus


Alignment Length:277 Identity:76/277 - (27%)
Similarity:126/277 - (45%) Gaps:46/277 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LPLLGSTQFLDMACGIRAHSPSVPRVKNGTVASLTSSPWMAFLHSTDGRFICGGSLITNRLVLTA 77
            :|:  :...|:..||.|..:|...:|..|..|.....||.|.|...:.. .||.:||:|..::||
  Rat   177 MPI--AEDLLNTCCGRRTITPGGHKVAGGQDAEEGEWPWQASLQQNNVH-RCGATLISNSWLITA 238

  Fly    78 AHCFLDRTELVARLGEYDREEYEMCHDSYCTYRIEAMVERGFR----HRHYNPMTMAYDIAILRL 138
            ||||:...         :.:::::   |:.....:...:|..:    |.:|:......|||::||
  Rat   239 AHCFVRSA---------NPKDWKV---SFGFLLSKPQAQRAVKSIVIHENYSYPAHNNDIAVVRL 291

  Fly   139 YRKVQYTDNIRPICIVIDPRWRKYIDSLDPLTGTGWGKTESEGDS------AKLRTVDLARKHPE 197
            ...|.|.:|||..|  :....:|:..:.|.:. ||||..:|:|||      .:::.:|     .:
  Rat   292 SSPVLYENNIRRAC--LPEATQKFPPNSDVVV-TGWGTLKSDGDSPNILQKGRVKIID-----NK 348

  Fly   198 VC---RRYATLSLTANQFCAG--NERSNLCNGDSGGPVGALIPYGKSKRFVQVGIASFTNTQCVM 257
            .|   :.|..: :|....|||  ..|.:.|.||||||   |:.......:...||.|: ..:|.:
  Rat   349 TCNSGKAYGGV-ITPGMLCAGFLEGRVDACQGDSGGP---LVSEDSKGIWFLAGIVSW-GDECAL 408

  Fly   258 VS---VFTDVMSYVDWI 271
            .:   |:|.|..|.|||
  Rat   409 PNKPGVYTRVTHYRDWI 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43336NP_001247122.1 Tryp_SPc 37..271 CDD:214473 68/251 (27%)
Tmprss11cNP_001399454.1 SEA 62..161 CDD:460188
Tryp_SPc 200..428 CDD:238113 70/252 (28%)
Blue background indicates that the domain is not in the aligned region.

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