DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43335 and Sp212

DIOPT Version :9

Sequence 1:NP_001247121.1 Gene:CG43335 / 12798413 FlyBaseID:FBgn0263040 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_996209.2 Gene:Sp212 / 2768666 FlyBaseID:FBgn0053329 Length:516 Species:Drosophila melanogaster


Alignment Length:255 Identity:77/255 - (30%)
Similarity:125/255 - (49%) Gaps:42/255 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IIGGSDAEITSHPWMAYLYNE----FHYFCAGTLITNQFVLTAAHCIE--ASKNLTVRLGGSGLT 100
            |:.|::.....:||::.:|::    ..:.|.|:||::..|::||||:.  ....:.|.||...|.
  Fly   277 IVRGNEFPRGQYPWLSAVYHKEVRALAFKCRGSLISSSIVISAAHCVHRMTEDRVVVGLGRYDLD 341

  Fly   101 --RSDGSMCQITAEDYSVSMAIKH-KYFTPSIMLNDIAMIRLARTVKFYDHIRPICIILDPAVRL 162
              ..||      ||..:|...:.| .|.|.|....|||:|.:.|.|.|.|.|.|||:....|.|.
  Fly   342 DYGEDG------AEMRNVMRLLWHPDYNTRSYSDADIALITIERPVTFNDIIAPICMWTVEASRT 400

  Fly   163 LLEDGMTLMATGWGL---ADKRMHPHLLQEAPITVMNRNVCSKLY-DVAITQGQICAGDKE-TNT 222
            :...|   ...|||.   :.:..:|.:: ||.|.  :..||:..: ...:|:..:|||::: :..
  Fly   401 VSTTG---FIAGWGRDEDSSRTQYPRVV-EAEIA--SPTVCASTWRGTMVTERSLCAGNRDGSGP 459

  Fly   223 CLGDSGGPLGGVVNYYGDLRFVQYGITSFGDIECRSPS---------IYTDLSTYSGWIN 273
            |:||||   ||::...|| |::..||.|.|:   |.|:         :|.|||.:..||:
  Fly   460 CVGDSG---GGLMVKQGD-RWLLRGIVSAGE---RGPAGTCQLNQYVLYCDLSKHINWIS 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43335NP_001247121.1 Tryp_SPc 41..272 CDD:214473 75/252 (30%)
Tryp_SPc 42..275 CDD:238113 77/255 (30%)
Sp212NP_996209.2 GD_N 23..122 CDD:292649
Tryp_SPc 277..514 CDD:238113 77/255 (30%)
Tryp_SPc 277..511 CDD:214473 75/252 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437266
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.