DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43110 and Prss52

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001419997.1 Gene:Prss52 / 683422 RGDID:1586868 Length:312 Species:Rattus norvegicus


Alignment Length:274 Identity:82/274 - (29%)
Similarity:124/274 - (45%) Gaps:35/274 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTYLFVWIFLCSLGSCQLAYSMFLKQPCGKTPVPKIISGSNASQQSAQYMAGIFNTTHLLCGGTI 65
            :.:|..|........|....|   .:|..:..|..|:.|..|:.....:..||.|....||||:|
  Rat    14 LAFLLSWAHSSQAWKCGQGLS---TRPLLQENVSAIMGGKPANISEVPWHVGIMNHGTHLCGGSI 75

  Fly    66 IHEDFVLTVAHC---KSTQTLFVR-----LGAYNINHPTDQIRVIETIAHPQYSNSTYANDIALV 122
            ::|.:||:.:||   .:...|.:|     |...|:.|.    :|.:.|.||::.:....|||||:
  Rat    76 LNEWWVLSASHCFDQINNANLEIRHGRDDLSTKNVKHE----KVDKLILHPKFDDWLLDNDIALL 136

  Fly   123 KLERSVIFNLNIQPICIHLDATLGKQIRYYNAF--GWGRTRNA---EQSDILQRIFVNRTNPMIC 182
            .|:..:..::|..|||   .:.|.....:.|.:  |||.|..:   .|:..||::.|:......|
  Rat   137 LLKSPLNLSINGIPIC---TSELSDLRIWKNCWVTGWGITNVSGVKVQTTKLQKVQVDLFRWDWC 198

  Fly   183 HLYLGMSPDPKQICATTDQG--DTCAGDSGGPLISKITYQGKNFDT--QFGITSYGTREC---NG 240
            ...|.:. ....:||.|..|  |.|.|||||.|:..   :.:|.:|  |.||.|:|. .|   |.
  Rat   199 GYVLPLL-TKNMLCAGTPDGGMDACQGDSGGALVCN---KKRNINTWYQVGIVSWGV-GCGKKNL 258

  Fly   241 VGLYTDVSQYSGWI 254
            .|:||.||.|..||
  Rat   259 PGVYTKVSPYLKWI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 76/239 (32%)
Prss52NP_001419997.1 Tryp_SPc 46..275 CDD:238113 76/239 (32%)

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