DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43110 and CG4053

DIOPT Version :9

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster


Alignment Length:240 Identity:71/240 - (29%)
Similarity:109/240 - (45%) Gaps:40/240 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KIISGSNASQQSAQYMAGIFN--TTHLLCGGTIIHEDFVLTVAHCK---STQTLFVRLGAYNINH 94
            :|:.|..|....|.|...|..  .|| :|.|.|::|.::||..||.   |.:.|.:.:|..:...
  Fly    34 RIVGGQEAEDGVAPYQVSIQTIWKTH-ICSGVILNEQWILTAGHCALDFSIEDLRIIVGTNDRLE 97

  Fly    95 PTDQIRVIETIAHPQYS-NSTYANDIALVKLERSVIFNLNIQPICIHLD-ATLGKQIRYYNAFGW 157
            |...:...|.:.|..|. ...|.|||||:.:..|:|||...|.:.:..: ...|..:   ...||
  Fly    98 PGQTLFPDEALVHCLYDIPYVYNNDIALIHVNESIIFNDRTQIVELSREQPPAGSTV---TLTGW 159

  Fly   158 GRTRNAEQS-DILQRIFVNRTNPMICH--------LYLGMSPDPKQICATTDQGD-TCAGDSGGP 212
            |...::..: ..||.:  |.|  :|.|        .:.|:  |...||..|.:|: .|:||||||
  Fly   160 GAPESSYPTVQYLQTL--NLT--IIAHEECRERWDFHDGI--DIGHICTFTREGEGACSGDSGGP 218

  Fly   213 LISKITYQGKNFDTQFGITSYGTRECNGVG---LYTDVSQYSGWI 254
            |:    ::||    ..|:.::| |.| |||   :|.:...|..||
  Fly   219 LM----WEGK----LVGLVNWG-RAC-GVGMPDMYANTVYYQDWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 35..254 CDD:214473 69/238 (29%)
Tryp_SPc 36..257 CDD:238113 71/239 (30%)
CG4053NP_650601.2 Tryp_SPc 34..253 CDD:214473 69/238 (29%)
Tryp_SPc 35..256 CDD:238113 71/239 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.