DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43110 and ea

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_524362.2 Gene:ea / 41858 FlyBaseID:FBgn0000533 Length:392 Species:Drosophila melanogaster


Alignment Length:277 Identity:80/277 - (28%)
Similarity:122/277 - (44%) Gaps:48/277 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 CGKTPVPKIISGSNASQQSAQYMAGIFNTT-------HLLCGGTIIHEDFVLTVAHCKSTQTL-- 83
            ||.....:|..|.........:||.|..|.       |  |||::|...:|:|.:||.:.:.|  
  Fly   120 CGNILSNRIYGGMKTKIDEFPWMALIEYTKSQGKKGHH--CGGSLISTRYVITASHCVNGKALPT 182

  Fly    84 -----FVRLGAYNINHPTD----------------QIRVIETIAHPQY--SNSTYANDIALVKLE 125
                 .||||.::.|...|                .:.|..||.||.|  ::....|||||::|.
  Fly   183 DWRLSGVRLGEWDTNTNPDCEVDVRGMKDCAPPHLDVPVERTIPHPDYIPASKNQVNDIALLRLA 247

  Fly   126 RSVIFNLNIQPICIHLDATLGKQIRY----YNAFGWGRTRNAEQSDILQRIFVNRTNPMIC-HLY 185
            :.|.:...::|||:.||..| :...:    .:..|||:|.....|::..:..|.......| ::|
  Fly   248 QQVEYTDFVRPICLPLDVNL-RSATFDGITMDVAGWGKTEQLSASNLKLKAAVEGFRMDECQNVY 311

  Fly   186 LGMS--PDPKQICATTDQG-DTCAGDSGGPLISKITYQGKNFDTQFGITSYGTRECNGV----GL 243
            ....  .:..|:||...:| |:|.||||||||...|.:...:....|:.|:|...| |:    |:
  Fly   312 SSQDILLEDTQMCAGGKEGVDSCRGDSGGPLIGLDTNKVNTYYFLAGVVSFGPTPC-GLAGWPGV 375

  Fly   244 YTDVSQYSGWIANIVRS 260
            ||.|.:|..||.|.:.|
  Fly   376 YTLVGKYVDWIQNTIES 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 76/264 (29%)
eaNP_524362.2 CLIP 37..89 CDD:463440
Tryp_SPc 128..389 CDD:238113 76/264 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.