DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43110 and snk

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:253 Identity:84/253 - (33%)
Similarity:124/253 - (49%) Gaps:33/253 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VPKIISGSNASQQSAQYMAGIFNT---------THLLCGGTIIHEDFVLTVAHCKSTQTL---FV 85
            ||.|:.|:........:||.:..|         ....|||.::.|.:|||.|||.::.:.   .|
  Fly   183 VPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMV 247

  Fly    86 RLGAYNINHPT---DQIRVIETIAHPQYSNSTYANDIALVKLERSVIFNLNIQPICIHLDATLGK 147
            ||||..:|..:   ..|:::..:.||:|.:|.|.:||||:||.|.|.|:..::|.|:.....|  
  Fly   248 RLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPEL-- 310

  Fly   148 QIRYYNAFGWGRTR-NAEQSDILQRIFVNRTNPMIC-HLYLGMSPDPK-----QICATTDQG--D 203
            ||....|.|||||. ...:|:.|:::.::....|.| .:|......|:     |.||....|  |
  Fly   311 QIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRD 375

  Fly   204 TCAGDSGGPLISKI-TYQGKNFDTQFGITSYGTREC---NGVGLYTDVSQYSGWIANI 257
            ||.||||||:.:.: .|....|  ..||||:| :.|   |..|:||.:..|..||..|
  Fly   376 TCQGDSGGPIHALLPEYNCVAF--VVGITSFG-KFCAAPNAPGVYTRLYSYLDWIEKI 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 81/248 (33%)
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 81/248 (33%)
Blue background indicates that the domain is not in the aligned region.

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