DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43110 and ovch1

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_073801826.1 Gene:ovch1 / 393114 ZFINID:ZDB-GENE-040426-834 Length:582 Species:Danio rerio


Alignment Length:251 Identity:67/251 - (26%)
Similarity:110/251 - (43%) Gaps:41/251 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KIISGSNASQQSAQYMAGIFNTTHLLCGGTIIHEDFVLTVAHC----KSTQTLFVRLGAYNINHP 95
            :||.|..|...|..:...:.......|||.|:.:.:|:|..||    |........:|.:|:::.
Zfish    56 RIIGGKEAWAHSWPWQVSLQYNDVPTCGGAILDQLWVITAGHCFKRYKKPSMWNAVVGLHNLDNA 120

  Fly    96 T----DQIRVIETIAHPQYSNSTYANDIALVKLERSVIFNLNIQPICIHLDATLGKQIRYYN--- 153
            .    :.|:|.:..:|..|:..|..|||||:||:..::|:..::||.:            :|   
Zfish   121 NESSRESIQVQKIFSHKNYNQKTNENDIALLKLQSPLVFSKFVRPIGV------------FNNDL 173

  Fly   154 -------AFGWGR-TRNAEQSDILQRIFVNRTNPMICHLYLGMSPDPKQICATTDQG--DTCAGD 208
                   ..|||. |.|..|:..||.:.|....|..|:.:.........|||..::|  |.|.||
Zfish   174 PPLVTCTVTGWGSVTENGPQASRLQEVNVTVYEPQKCNRFYRGKVLKSMICAGANEGGMDACQGD 238

  Fly   209 SGGPLISKITYQGKNFDTQFGITSYGTRECNGV---GLYTDVSQYSGWIANIVRSK 261
            |||||   ..:.|:.:... |:.|:|. .|...   |:||.:..|..|:.:.:|.:
Zfish   239 SGGPL---SCFDGERYKLA-GVVSWGV-GCGRAQKPGVYTTLYHYRQWMVSSMRGE 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 66/244 (27%)
ovch1XP_073801826.1 None

Return to query results.
Submit another query.