DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43110 and Ctrc

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001071117.1 Gene:Ctrc / 362653 RGDID:1308379 Length:268 Species:Rattus norvegicus


Alignment Length:272 Identity:82/272 - (30%)
Similarity:121/272 - (44%) Gaps:41/272 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LGSCQLAYSMFLKQPCGKTPVP-----KIISGSNAS------QQSAQYMAGIFNTTHLLCGGTII 66
            ||...||..:.....||....|     :::.|.:|.      |.|.||:..  :|....|||::|
  Rat     2 LGITVLAAILACASCCGNPAFPPNLSTRVVGGEDAVPNSWPWQVSLQYLKD--DTWRHTCGGSLI 64

  Fly    67 HEDFVLTVAHCKSTQ-TLFVRLGAYNINHPTDQIRV---IETI-AHPQYSNSTYANDIALVKLER 126
            ....|||.|||.:.. |..|.||.||:....::..|   ::|| .|.:::.....||||::||..
  Rat    65 TTSHVLTAAHCINKDFTYRVGLGKYNLTVEDEEGSVYAEVDTIYVHEKWNRLFLWNDIAIIKLAE 129

  Fly   127 SVIFNLNIQPICIHLDATLGKQIRYYNAFGWGRT-RNAEQSDILQRIFVNRTNPMICHL------ 184
            .|..:..||..||..:.:|..|.......||||. .|...:::||:    ...|::.|.      
  Rat   130 PVELSNTIQVACIPEEGSLLPQDYPCYVTGWGRLWTNGPIAEVLQQ----GLQPIVSHATCSRLD 190

  Fly   185 YLGMSPDPKQICATTDQG--DTCAGDSGGPLISKITYQGKNFDTQ-FGITSYGTRE-CN---GVG 242
            :..:......:||..| |  ..|.|||||||    ..|.::...| .||.|:|:.. ||   ...
  Rat   191 WWFIKVRKTMVCAGGD-GVISACNGDSGGPL----NCQAEDGSWQVHGIVSFGSSSGCNVHKKPV 250

  Fly   243 LYTDVSQYSGWI 254
            ::|.||.|:.||
  Rat   251 VFTRVSAYNDWI 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 75/244 (31%)
CtrcNP_001071117.1 Tryp_SPc 30..265 CDD:238113 75/244 (31%)

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