DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43110 and sphinx1

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_729255.2 Gene:sphinx1 / 318005 FlyBaseID:FBgn0052383 Length:253 Species:Drosophila melanogaster


Alignment Length:256 Identity:62/256 - (24%)
Similarity:93/256 - (36%) Gaps:63/256 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PKIISGSNASQQSAQYMAGIF----NTTHLLCG-GTIIHEDFVLTVAHCKSTQTLFVRLGAYNIN 93
            |:|..|..|...:..|:.||.    .|:.|..| ||||...::|||........:.|.|.:....
  Fly    24 PRIAGGYRAKTFTIIYLVGIVYFKSQTSSLNYGAGTIISNQWILTVKTVLKYSYIEVHLASRRSY 88

  Fly    94 HPTDQIRVIETIAHPQYSNSTYANDIALVK---------------------LERSVIFNLNIQPI 137
            ...|.||:.:......|.|.   :.|||||                     .||.|   .|:..:
  Fly    89 RGFDIIRIYKENFRFHYDND---HVIALVKCPYQKFDRRMDRVRVPAYDTRFERYV---GNMTMV 147

  Fly   138 CIHLDATLGKQIRYYNAFGWG-RTRNAEQSDILQRIFVNRTNPMICHLYLGMSPDPKQICATTDQ 201
            |                 |:| ..|:|:..:.::.|.|...|...|..|  .:|.......|:.:
  Fly   148 C-----------------GYGTEKRHAKLPEWMRCIEVEVMNNTECAKY--YTPLKWYEMCTSGE 193

  Fly   202 G--DTCAGDSGGPLISKITYQGKNFDTQFGITSYGTRECNGVG---LYTDVSQYSGWIANI 257
            |  ..|.||.||.:::    .|.| .|..||.......|: :|   ::..||.:..||..:
  Fly   194 GFKGVCEGDIGGAVVT----MGPN-PTFIGIIWLMPENCS-IGYPSVHIRVSDHIKWIKRV 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 61/252 (24%)
sphinx1NP_729255.2 Tryp_SPc 25..245 CDD:473915 59/250 (24%)

Return to query results.
Submit another query.