DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43110 and F12

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001014028.1 Gene:F12 / 306761 RGDID:1359175 Length:603 Species:Rattus norvegicus


Alignment Length:321 Identity:80/321 - (24%)
Similarity:132/321 - (41%) Gaps:82/321 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WIFLCSLGSCQL----------AYSMFLKQP--------------------------------CG 29
            |.: |.|..||:          ::.|...:|                                ||
  Rat   286 WDY-CDLEQCQMPTLTSPVSPESHDMLKPRPPILQMPQFPSLSDALDNSTRNQNVVSRTSTVVCG 349

  Fly    30 K------TPVPKIISGSNASQQSAQYMAGIFNTTHLLCGGTIIHEDFVLTVAHC----KSTQTLF 84
            :      :.:.:::.|..|...|..|:|.:: .....|.|::|...:|||.|||    .:.:.|.
  Rat   350 QRFRKRLSSLRRVVGGLVALPGSHPYIAALY-WGDSFCAGSLIDPCWVLTAAHCLQKRPAPEELT 413

  Fly    85 VRLGAYNINHPTDQIRVIETIA------HPQYSNSTYANDIALVKL----ERSVIFNLNIQPICI 139
            |.||....|...::   .:|:|      |..:|:.||.:|:||::|    ....|.:.::||:|:
  Rat   414 VVLGQDRHNQSCER---CQTLAVHSYRLHEGFSSKTYQHDLALLRLRGRKNSCAILSPHVQPVCL 475

  Fly   140 HLDATLGKQIRYYNAFGWG-RTRNAEQ-SDILQR-----IFVNRTNPMICHLYLGMSPDPKQICA 197
            ...|....:.......||| :...||: :..||.     |.::|.:....|   |.:..|..:||
  Rat   476 PSSAAPPSETVLCEVAGWGHQFEGAEEYATFLQEAQVPFISLDRCSSSNVH---GDAILPGMLCA 537

  Fly   198 TTDQG--DTCAGDSGGPLISKITYQGKNFDTQFGITSYGT--RECNGVGLYTDVSQYSGWI 254
            ...:|  |.|.|||||||:.......:.. |..|:.|:|:  .:.|..|:||||:.|..||
  Rat   538 GFLEGGADACQGDSGGPLVCDEGVTERQL-TLRGVISWGSGCGDRNKPGVYTDVANYLDWI 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 71/244 (29%)
F12NP_001014028.1 FN2 40..87 CDD:238019
EGF_CA 95..130 CDD:238011
FN1 132..170 CDD:238018
EGF 177..207 CDD:394967
Kringle 216..294 CDD:395005 3/8 (38%)
Tryp_SPc 362..600 CDD:238113 71/244 (29%)
Blue background indicates that the domain is not in the aligned region.

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