DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43110 and Tmprss13

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_063121182.1 Gene:Tmprss13 / 300682 RGDID:1310872 Length:552 Species:Rattus norvegicus


Alignment Length:261 Identity:78/261 - (29%)
Similarity:127/261 - (48%) Gaps:27/261 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 CG-KTPVPKIISGSNASQQSAQYMAGI-FNTTHLLCGGTIIHEDFVLTVAHC------KSTQTLF 84
            || :....:|:.|:..|:....:...: |.||| :||||:|...:|||.|||      |..:...
  Rat   302 CGLRAMTGRIVGGALTSESKWPWQVSLHFGTTH-ICGGTLIDAQWVLTAAHCFFVTREKILEGWK 365

  Fly    85 VRLGAYNINHPTDQIRVIETIAHPQYSNSTYANDIALVKLERSVIFNLNIQPICIHLDA-TLGKQ 148
            |..|..|::...:...:.:.|.:..|::.....|||||:|.:.:..:.:|.|.|:.|.. |.|..
  Rat   366 VYAGTSNLHQLPEAASISQIIINGNYTDEQDDYDIALVRLSKPLTLSAHIHPACLPLHGQTFGLN 430

  Fly   149 IRYYNAFGWGRTRNAEQ--SDILQRIFVNRTNPMICHLYLGMSP--DPKQICATTDQG--DTCAG 207
            ...: ..|:|:|:..::  |..|:.:.||..:...|:.||....  .|:.:||...:|  |:|.|
  Rat   431 ETCW-ITGFGKTKETDEKTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGGRDSCQG 494

  Fly   208 DSGGPLISKITYQGKNFDTQFGITSYGT--RECNGVGLYTDVSQYSGWIANIVRSKQDRSVVSRR 270
            ||||||:.    :..|.....|:||:||  .:.|..|:||.|::...||..    |.:..|..|:
  Rat   495 DSGGPLVC----EQNNRWYLAGVTSWGTGCGQKNKPGVYTKVTEVLPWIYR----KMESEVRFRK 551

  Fly   271 S 271
            |
  Rat   552 S 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 72/236 (31%)
Tmprss13XP_063121182.1 None

Return to query results.
Submit another query.