DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43110 and Gzmm

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_063119183.1 Gene:Gzmm / 29252 RGDID:620022 Length:266 Species:Rattus norvegicus


Alignment Length:219 Identity:64/219 - (29%)
Similarity:100/219 - (45%) Gaps:35/219 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KIISGSNASQQSAQYMAGIFNTTHLLCGGTIIHEDFVLTVAHCKS--TQTLFVRLGAYNINHPTD 97
            :||.|..|...|..||..:.||...:|||.::|:.:|||.|||.|  .|.|.:..|.::::.|.|
  Rat    26 QIIGGREAVPHSRPYMVSLQNTKSHVCGGVLVHQKWVLTAAHCLSEPLQQLKLVFGLHSLHDPQD 90

  Fly    98 ---QIRVIETIAHPQYSNSTYANDIALVKLERSVIFNLNIQPICIHLDATLGKQIR-------YY 152
               ...:.:.|.||.| |..|.||:||:||:..|..:.|::|:      .|.::.|       ..
  Rat    91 PGLTFYIKQAIKHPGY-NLKYENDLALLKLDGRVKPSKNVKPL------ALPRKPRDKPAEGSRC 148

  Fly   153 NAFGWGRTRNAEQ-SDILQRIFVNRTNPMICH---LYLGMSPDPKQICATTDQGDTCAGDSG-GP 212
            :..|||.|....| :..||.:.:...:..:|:   .:.|:..| ..:|..       ||..| .|
  Rat   149 STAGWGITHQRGQLAKSLQELDLRLLDTRMCNNSRFWNGVLTD-SMLCLK-------AGAKGQAP 205

  Fly   213 LISKITYQGKNFD-TQFGITSYGT 235
              .|:|....|.. |.:|:...||
  Rat   206 --CKVTGVAWNQPLTPWGVEEGGT 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 64/218 (29%)
GzmmXP_063119183.1 None

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