DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43110 and Hpn

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_038958886.1 Gene:Hpn / 29135 RGDID:61982 Length:539 Species:Rattus norvegicus


Alignment Length:287 Identity:90/287 - (31%)
Similarity:124/287 - (43%) Gaps:62/287 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 CQLAYSMFLK---QPCG--KTPVPKIISGSNAS------QQSAQYMAGIFNTTHLLCGGTIIHED 69
            |......||.   |.||  |.||.:|:.|.::|      |.|.:|     :.|| ||||:::..|
  Rat   179 CDCPRGRFLTATCQDCGRRKLPVDRIVGGQDSSLGRWPWQVSLRY-----DGTH-LCGGSLLSGD 237

  Fly    70 FVLTVAHC-------KSTQTLFVRLGAYNINHPTDQIRVIETIAHPQY---------SNSTYAND 118
            :|||.|||       .|...:|....|....|.. |:.|...|.|..|         .||   ||
  Rat   238 WVLTAAHCFPERNRVLSRWRVFAGAVARTSPHAV-QLGVQAVIYHGGYLPFRDPTIDENS---ND 298

  Fly   119 IALVKLERSVIFNLNIQPICIHLDATLGKQI---RYYNAFGWGRTR-NAEQSDILQRIFVNRTNP 179
            ||||.|..|:.....|||:|:   ...|:.:   :.....|||.|: ..:|:.:||...|...:.
  Rat   299 IALVHLSSSLPLTEYIQPVCL---PAAGQALVDGKVCTVTGWGNTQFYGQQAVVLQEARVPIISN 360

  Fly   180 MICHLYLGMSPD-------PKQICATTDQG--DTCAGDSGGPLISKITYQGKNFDTQFGITSYGT 235
            .:|:     |||       ||..||...:|  |.|.||||||.:.:....|.:.....||.|:||
  Rat   361 EVCN-----SPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDRISGTSRWRLCGIVSWGT 420

  Fly   236 REC---NGVGLYTDVSQYSGWIANIVR 259
             .|   ...|:||.|..:..||...::
  Rat   421 -GCALARKPGVYTKVIDFREWIFQAIK 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 81/258 (31%)
HpnXP_038958886.1 Hepsin-SRCR 92..200 CDD:462736 7/20 (35%)
Tryp_SPc 204..441 CDD:238113 79/255 (31%)

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