DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43110 and Tmprss11g

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001008554.1 Gene:Tmprss11g / 289546 RGDID:1306446 Length:417 Species:Rattus norvegicus


Alignment Length:261 Identity:79/261 - (30%)
Similarity:123/261 - (47%) Gaps:40/261 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 CSLGSCQLAYSMFLKQPCGKTPVPKIISGSNA-SQQSAQYMAGIFNTTHLLCGGTIIHEDFVLTV 74
            |.||   :.|....:...||.      :|||: ..||:..:.||.     |||.::|...:::|.
  Rat   174 CGLG---MEYPRIARIADGKP------AGSNSWPWQSSLQVEGIH-----LCGASLIGSQWLVTS 224

  Fly    75 AHC----KSTQTLFVRLGAYNINHPTDQIRVIETIAHPQYSNSTYANDIALVKLERSVIFNLNIQ 135
            |||    |:.:...|..|. .:.:|....:|...|.|..|:...:.:|||:|||...|:|:.|::
  Rat   225 AHCFDNYKNPKLWTVSFGR-TLGNPLTTRKVESIIIHENYAAHKHDDDIAVVKLSSPVLFSENLR 288

  Fly   136 PICIHLDAT---LGKQIRYYNAFGWGRTR-NAEQSDILQRIFVNRTNPMIC---HLYLGMSPDPK 193
            .:|:. :||   |.|...:..  |||..: |....:.||.:.:...:..:|   ::| |.:....
  Rat   289 TVCLP-EATFQVLPKSKVFVT--GWGALKANGPFPNSLQEVEIEIISNDVCNQVNVY-GGAISSG 349

  Fly   194 QICA--TTDQGDTCAGDSGGPLISKITYQGKNFDTQFGITSYGTREC---NGVGLYTDVSQYSGW 253
            .|||  .|.:.|.|.|||||||:..   ..:|.....||.|:|. :|   |..|:||.|:.|..|
  Rat   350 MICAGFLTGKLDACEGDSGGPLVIS---DNRNKWYLLGIVSWGI-DCGKENKPGIYTRVTHYRNW 410

  Fly   254 I 254
            |
  Rat   411 I 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 73/236 (31%)
Tmprss11gNP_001008554.1 SEA 48..146 CDD:460188
Tryp_SPc 185..411 CDD:214473 73/245 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.