DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43110 and CG30090

DIOPT Version :9

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_725487.1 Gene:CG30090 / 246448 FlyBaseID:FBgn0050090 Length:291 Species:Drosophila melanogaster


Alignment Length:273 Identity:104/273 - (38%)
Similarity:138/273 - (50%) Gaps:33/273 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LCSLGSCQLAYSMFLKQPCG---KTPVPKIISGSNASQQSAQYMAGIFNTTHLLCGGTIIHEDFV 71
            |||||:.:     :|:..||   .|...|||.|.:|...|..:||.|.::..|:||||:|.:.||
  Fly    16 LCSLGNGE-----YLEPRCGLTANTIAFKIIGGRDAIINSNPWMAYIHSSVKLICGGTLITQRFV 75

  Fly    72 LTVAHC-KSTQTLFVRLGAYN----------------INHPTDQIRVIETIAHPQYSNSTYANDI 119
            ||.||| .....:.||||.|:                ..|..|.     ...|.::|.....|||
  Fly    76 LTAAHCVNEGSAVKVRLGEYDDTATEDCNSKICIPRAEEHDVDM-----AFRHGKFSEIKNLNDI 135

  Fly   120 ALVKLERSVIFNLNIQPICIHLDAT---LGKQIRYYNAFGWGRTRNAEQSDILQRIFVNRTNPMI 181
            ||::|.:.|.|..:|.||||.|..:   |...|.::.|.|||.||......:||...:.|.|...
  Fly   136 ALLRLAKFVTFKAHISPICIILGTSKRELVDSIEWFVATGWGETRTHRTRGVLQITQLQRYNSSQ 200

  Fly   182 CHLYLGMSPDPKQICATTDQGDTCAGDSGGPLISKITYQGKNFDTQFGITSYGTRECNGVGLYTD 246
            |...||......||||.....|||.|||||||...:.:..|....|||:.|||:|||:|:|:|||
  Fly   201 CMQALGRLVQQNQICAGRLGSDTCNGDSGGPLFQTVRHMDKMRPVQFGVVSYGSRECSGIGVYTD 265

  Fly   247 VSQYSGWIANIVR 259
            |..|:.|||.:|:
  Fly   266 VYSYADWIATVVQ 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 35..254 CDD:214473 91/238 (38%)
Tryp_SPc 36..257 CDD:238113 93/240 (39%)
CG30090NP_725487.1 Tryp_SPc 39..273 CDD:214473 91/238 (38%)
Tryp_SPc 40..276 CDD:238113 93/240 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463441
Domainoid 1 1.000 102 1.000 Domainoid score I4289
eggNOG 1 0.900 - - E33208_3BQ4K
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I7012
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000404
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_108863
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.790

Return to query results.
Submit another query.