DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43110 and CG30025

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_725036.1 Gene:CG30025 / 246398 FlyBaseID:FBgn0050025 Length:253 Species:Drosophila melanogaster


Alignment Length:263 Identity:73/263 - (27%)
Similarity:111/263 - (42%) Gaps:28/263 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WIFLCSLGSCQLAYSMFLKQPCGKTPV--PKIISGSNASQQSAQYMAGIFNTTHLLCGGTIIHED 69
            ::.|.|..:|.|..::    |.|..|.  .:|:.||..:..|..:...:..:....|||:|...:
  Fly     4 FVILLSAVACALGGTV----PEGLLPQLDGRIVGGSATTISSFPWQISLQRSGSHSCGGSIYSSN 64

  Fly    70 FVLTVAHC---KSTQTLFVRLGAYNINHPTDQIRVIETIAHPQYSNSTYANDIALVKLERSVIFN 131
            .::|.|||   .|...|.:|.|:...:.......|.....|..|:.:|..||||::|:..::.|:
  Fly    65 VIVTAAHCLQSVSASVLQIRAGSSYWSSGGVTFSVSSFKNHEGYNANTMVNDIAIIKINGALTFS 129

  Fly   132 LNIQPICIHLDATLGKQIRYYNAFGWGRTRNAEQSDI---LQRIFVNRTNPMIC--HLY-LGMSP 190
            ..|:  .|.|.::........:..||| |.:...|.|   ||.:.||..:...|  ..| .|...
  Fly   130 STIK--AIGLASSNPANGAAASVSGWG-TLSYGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQI 191

  Fly   191 DPKQICATTDQGDTCAGDSGGPLISKITYQGKNFDTQFGITS--YGTRECNGVGLYTDVSQYSGW 253
            ....|||.....|.|.|||||||:|.        ....|:.|  ||....|..|:|.||:....|
  Fly   192 RSTMICAAASGKDACQGDSGGPLVSG--------GVLVGVVSWGYGCAYSNYPGVYADVAALRSW 248

  Fly   254 IAN 256
            :.|
  Fly   249 VIN 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 66/232 (28%)
CG30025NP_725036.1 Tryp_SPc 30..249 CDD:214473 64/229 (28%)

Return to query results.
Submit another query.