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Protein Alignment CG43110 and Tmprss4

DIOPT Version :10

Sequence 1:	NP_001246396.1	Gene:	CG43110 / 12798330	FlyBaseID:	FBgn0262570	Length:	483	Species:	Drosophila melanogaster
Sequence 2:	NP_663378.1	Gene:	Tmprss4 / 214523	MGIID:	2384877	Length:	435	Species:	Mus musculus

Alignment Length:	255	Identity:	87/255 - (34%)
Similarity:	125/255 - (49%)	Gaps:	35/255 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly    28 CGKT-PVPKIISGSNASQQSAQYMAGI-FNTTHLLCGGTIIHEDFVLTVAHC----KSTQTLFVR 86
            |||: ..|:::.|..|...|..:...| :|..| :|||:|:...::||.|||    ....:..||
Mouse   194 CGKSLKTPRVVGGVEAPVDSWPWQVSIQYNKQH-VCGGSILDPHWILTAAHCFRKYLDVSSWKVR 257

  Fly    87 LGAYNI--NHPTDQIRVIETIAHPQYSNSTY--ANDIALVKLERSVIFNLNIQPICIHL-DATLG 146
            .|: ||  |.|:..:..| .||.|   |..|  ..|||||||:..:.|:.:::|||:.. |..|.
Mouse   258 AGS-NILGNSPSLPVAKI-FIAEP---NPLYPKEKDIALVKLQMPLTFSGSVRPICLPFSDEVLV 317

  Fly   147 KQIRYYNAFGWGRT--RNAEQSDILQRIFVNRTNPMICH---LYLGMSPDPKQICATTDQG--DT 204
            .....: ..|||.|  ...:.||:|.:..|...:...|:   .|.| ....:.:||.|.||  ||
Mouse   318 PATPVW-VIGWGFTEENGGKMSDMLLQASVQVIDSTRCNAEDAYEG-EVTAEMLCAGTPQGGKDT 380

  Fly   205 CAGDSGGPLISKITYQGKNFDTQFGITSYGTRECNG---VGLYTDVSQYSGWIANIVRSK 261
            |.|||||||:    |....:.. .||.|:| ..|.|   .|:||.|:.|..||.|:.:|:
Mouse   381 CQGDSGGPLM----YHSDKWQV-VGIVSWG-HGCGGPSTPGVYTKVTAYLNWIYNVRKSE 434

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.