DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43110 and Gzmb

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:263 Identity:83/263 - (31%)
Similarity:116/263 - (44%) Gaps:64/263 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KTPVPKIISGSNASQQSAQYMAGIFNTTHLL--------CGGTIIHEDFVLTVAHCKSTQTLFVR 86
            ||...:||.|..|...|..|||.:    .::        |||.:|.||||||.|||..:: :.|.
  Rat    15 KTEAGEIIGGHEAKPHSRPYMAYL----QIMDEYSGSKKCGGFLIREDFVLTAAHCSGSK-INVT 74

  Fly    87 LGAYNINHPTDQ---IRVIETIAHPQYSNSTYANDIALVKL----ERSVIF--------NLNIQP 136
            |||:||......   |.|::.|.||.|::.|.:|||.|:||    :||...        |:.::|
  Rat    75 LGAHNIKEQEKMQQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNLPRRNVKVKP 139

  Fly   137 --ICIHLDATLGKQIRYYNAFGWGRT-RNAEQSDILQRIFVNRTNPMICHLYLGMSPD-PKQICA 197
              :|             |.| |||:. ...:.||.||.:.:.......|..||....| ..:|||
  Rat   140 GDVC-------------YVA-GWGKLGPMGKYSDTLQEVELTVQEDQKCESYLKNYFDKANEICA 190

  Fly   198 TTDQGD------TCAGDSGGPLISKITYQGKNFDTQFGITSYGTRECNGVGLYTDVSQYSGWIAN 256
                ||      :..|||||||:.|        ....||.|||..:.:....:|.||.:..||..
  Rat   191 ----GDPKIKRASFRGDSGGPLVCK--------KVAAGIVSYGQNDGSTPRAFTKVSTFLSWIKK 243

  Fly   257 IVR 259
            .::
  Rat   244 TMK 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 81/253 (32%)
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 81/253 (32%)

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