DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43110 and Gzmc

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_599159.1 Gene:Gzmc / 171290 RGDID:620019 Length:248 Species:Rattus norvegicus


Alignment Length:243 Identity:73/243 - (30%)
Similarity:113/243 - (46%) Gaps:32/243 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KIISGSNASQQSAQYMAGIF-----NTTHLLCGGTIIHEDFVLTVAHCKSTQTLFVRLGAYNI-- 92
            :||.|:..|..|..||| .|     |.....|||.::.::||||.|||:. :::.|.|||:||  
  Rat    20 EIIGGNEVSPHSRPYMA-YFEFLNDNGKKTFCGGFLVRDNFVLTAAHCRG-RSMTVTLGAHNIKA 82

  Fly    93 NHPTDQ-IRVIETIAHPQYSNSTYANDIALVKLERSVIFNLNIQPICI-HLDATLGKQIRYYNAF 155
            ...|.| |.|.....||.|:....:|||.|:||.||......::|:.: ..:|.:......|.| 
  Rat    83 KEKTQQIIPVANATPHPAYNPDKRSNDIMLLKLVRSAKRTSAVRPLNLPRRNAHVKPGDVCYMA- 146

  Fly   156 GWGR-TRNAEQSDILQRIFVNRTNPMIC-----HLYLGMSPDPKQICA--TTDQGDTCAGDSGGP 212
            |||: |...|..:.|:.:.:......:|     ..|:..|    :||.  :..:|.:...|||||
  Rat   147 GWGKITPQGEFPNTLREVELTVQKDRVCESQFQRSYIKAS----EICVGDSKTKGASFEEDSGGP 207

  Fly   213 LISKITYQGKNFDTQFGITSYGTRECNGVGLYTDVSQYSGWIANIVRS 260
            |:.|        ....||.|||..:.:...::|.|..:..||...:::
  Rat   208 LVCK--------KAAAGIVSYGKTDGSAPQVFTRVLSFLSWIKKTMKN 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 73/237 (31%)
GzmcNP_599159.1 Tryp_SPc 21..244 CDD:238113 73/237 (31%)

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