DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43110 and LOC1281970

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_321960.3 Gene:LOC1281970 / 1281970 VectorBaseID:AGAMI1_005904 Length:268 Species:Anopheles gambiae


Alignment Length:253 Identity:73/253 - (28%)
Similarity:103/253 - (40%) Gaps:47/253 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PKIISGSNASQQSAQYMAGI---FNTTHL----LCGGTIIHEDFVLTVAHCKSTQTL---FVR-- 86
            |||:.|..|......|...:   :|....    .|||::|.|.||||..||..:...   |..  
Mosquito    25 PKIVGGEEAIAHEFPYQISLQWNYNNDEQDPFHFCGGSLIAEKFVLTAGHCVPSAISPDGFPEAV 89

  Fly    87 LGAYNINH---PTDQIRVIETIAHPQYSNSTYANDIALVKLERSVIFNLNIQ------PICIHLD 142
            .|.::.:.   ...:.|:.|...|..|..|...||||:.::::....|.|||      |..|...
Mosquito    90 AGEHDFSQYDAGVQRRRIAEMYVHEDYEGSVGPNDIAIFRVDKPFHLNRNIQLVSLPEPNAIPTG 154

  Fly   143 ATLGKQIRYYNAFGWGRTR-NAEQSDILQRIFVNRTNPM----ICH-LYLGMSPDPKQICATTDQ 201
            .|        ...|||.|. :.|.|  ...|.:..|.|:    :|. :|...:.....|||.|.:
Mosquito   155 ET--------TISGWGSTSFSFEPS--YPNILMKTTLPIMDLEVCRKIYFTETVADSNICAGTME 209

  Fly   202 G--DTCAGDSGGPLISKITYQGKNFDTQFGITSYGTRECNGV---GLYTDVSQYSGWI 254
            |  ..|:|||||||:     |..:...|.||.|:|...|.|.   |::..||.:..||
Mosquito   210 GTSSVCSGDSGGPLV-----QIDDEIVQVGIVSWGGIPCGGYKNPGVFVRVSYFIDWI 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 71/251 (28%)
LOC1281970XP_321960.3 None

Return to query results.
Submit another query.