DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43110 and LOC1277089

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_316522.5 Gene:LOC1277089 / 1277089 VectorBaseID:AGAMI1_006180 Length:281 Species:Anopheles gambiae


Alignment Length:286 Identity:75/286 - (26%)
Similarity:118/286 - (41%) Gaps:62/286 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YLFVWIFLCSLGSCQLAYSMFLKQPCGKTPVPKIISGSNASQQSAQYMAGIFNTTHLL---CGGT 64
            :..|..||..|||.|..       |..:.. |::..|:  :....||.:.:...|..:   |.||
Mosquito     4 FALVLAFLALLGSTQAL-------PADEAG-PRVTGGT--ATLLGQYPSAVIIETPYIPQNCMGT 58

  Fly    65 IIHEDFVLTVAHCKSTQTLFV-------RLGAYNIN----HPTDQIR-VIETIAHPQYSNSTYAN 117
            :::...|||.|.|....|.||       |:.|.:||    ....::| ||.:..||.|:..|..|
Mosquito    59 VVNRQHVLTAASCVMNPTTFVMINPFWLRVIAGDINIVPVSTRREVRQVIRSYVHPNYNRLTDGN 123

  Fly   118 DIALVKLERSV-IFNLNIQPICIHLDATLGKQIRYYNA----FGWGRTRNAEQSDILQRIFVNRT 177
            ::|:::::... .|:..|:|      |.|..:|...|.    .|||.|:|...:.:....|| .|
Mosquito   124 NLAVLRVDVPFPEFHNTIEP------ALLNARILADNTQCVFAGWGATQNQVTAVVRPNQFV-VT 181

  Fly   178 NPMICHLYLGMS------PDPKQICA---TTDQGDTCAGDSGGPLI--SKITYQGKNFDTQFGIT 231
            .|::..:....:      .....|||   ...|...|.|:.||.|.  .::|          |:.
Mosquito   182 QPILATVSCNAANVHNNRVQQTMICAGALAQSQNAVCRGNMGGGLYCNGRLT----------GVL 236

  Fly   232 SYGTREC---NGVGLYTDVSQYSGWI 254
            ::| ..|   |..|:|.||.||:.||
Mosquito   237 AFG-MGCGVANQPGVYMDVRQYTQWI 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 66/253 (26%)
LOC1277089XP_316522.5 None

Return to query results.
Submit another query.