DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43110 and LOC1274708

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_313869.6 Gene:LOC1274708 / 1274708 VectorBaseID:AGAMI1_014022 Length:327 Species:Anopheles gambiae


Alignment Length:254 Identity:71/254 - (27%)
Similarity:111/254 - (43%) Gaps:40/254 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 CGKT-PVPKIISGSNASQQSAQYMAGIFNTTHLLCGGTIIHEDFVLTVAHCKSTQTLFVRLGAYN 91
            ||:| .:.:|:.|.........:||.:..:....|||::|.:..|||.|||         :..:|
Mosquito    74 CGRTNRLTRIVGGQETQVNQYPWMAMLQYSGTFYCGGSLISDRHVLTAAHC---------VHGFN 129

  Fly    92 INHPT------DQI----------RVIETIAHPQYSNSTYANDIALVKLERSVIFNLNIQPICIH 140
            .|..:      |::          :|:..|.|..|:::.|.:|||:::|...:.....::|:|: 
Mosquito   130 RNKISVVLMEHDRVSTSESMTMVSKVLRVIEHNGYNSNNYNSDIAILRLATVMTIEDKLRPVCL- 193

  Fly   141 LDATLGKQIRYYNAF--GWGRT-RNAEQSDILQRIFVNRTNPMICHL--YLGMSPDPKQICATTD 200
              .|..|....|:..  |||.| .|...|..||.:.|...:...|..  |.........:||..|
Mosquito   194 --PTPKKPFTGYDGIVTGWGATSENGAISTNLQEVTVPIMSNADCRKTGYGASRITDNMLCAGYD 256

  Fly   201 QG--DTCAGDSGGPLISKITYQGKNFDTQFGITSYGTREC---NGVGLYTDVSQYSGWI 254
            :|  |:|.|||||||.........|.....||.|:| ..|   |..|:||.|:::..||
Mosquito   257 EGKKDSCQGDSGGPLHVIKQNSTDNVHQIAGIVSWG-EGCAKPNYPGVYTRVNRFGTWI 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 68/245 (28%)
LOC1274708XP_313869.6 None

Return to query results.
Submit another query.