DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43110 and ndl

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_061502719.1 Gene:ndl / 1269883 VectorBaseID:AGAMI1_012252 Length:2292 Species:Anopheles gambiae


Alignment Length:271 Identity:82/271 - (30%)
Similarity:125/271 - (46%) Gaps:40/271 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KIISGSNASQQSAQYMAGIFNTTHLLCGGTIIHEDFVLTVAHC--KSTQTLF-VRLGAYNINHPT 96
            :|:.||:|..::..::.|||......|||:|.:|.::::.|||  ...|..| ||.|........
Mosquito   958 RIVGGSHADPEAYPFIVGIFRDGKYHCGGSIYNEHWIISAAHCCDNFDQHYFEVRSGMLRKRSFA 1022

  Fly    97 DQI---RVIETIAHPQYSNSTYANDIALVKLERSVIFNLNIQPICI--------HLDATLG-KQI 149
            .|:   ||...|.|..||:|..||||||:::|....:|..::|||:        ..|...| |..
Mosquito  1023 PQVQITRVTHMIVHHAYSSSLMANDIALMRVEHPFHYNRWVRPICMPERHRTTDDRDWIWGPKAG 1087

  Fly   150 RYYNAFGWGRTR-NAEQSDILQRIFVNRTNPMICHLYLGMSPDPKQICATTDQG--DTCAGDSGG 211
            ....|.|||..| .....|.|.::.|    |::.:.......|..||||..:.|  |.|.|||||
Mosquito  1088 TVCTAIGWGALRERGGAPDHLMQVSV----PILGYCKHKSDRDSLQICAAEEDGGHDACQGDSGG 1148

  Fly   212 PLISKITYQGKNFDTQF---GITSY--GTRECNGVGLYTDVSQYSGWIANIVRSKQDRSVVSRRS 271
            |.:.    |.|:...::   |:.|:  |....:..|:||.|:.:..|||    .|.:..:.:|.:
Mosquito  1149 PFVC----QSKSNPFEWYLAGVVSHGEGCARAHEPGVYTRVALFIDWIA----EKVNAPLPARTA 1205

  Fly   272 NGMFLYSDCTG 282
            .     :||.|
Mosquito  1206 R-----ADCPG 1211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 77/243 (32%)
ndlXP_061502719.1 None

Return to query results.
Submit another query.