DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43110 and St14

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_446087.1 Gene:St14 / 114093 RGDID:69288 Length:855 Species:Rattus norvegicus


Alignment Length:272 Identity:77/272 - (28%)
Similarity:124/272 - (45%) Gaps:43/272 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 CSLGS----CQLAYSMFLKQPCGKTPVPKIISGSNASQQSAQYMAGI--FNTTHLLCGGTIIHED 69
            ||.||    |......|.||       .:::.|:||.:....:...:  ....| |||.::|..|
  Rat   593 CSDGSDEKNCDCGLRSFTKQ-------ARVVGGTNADEGEWPWQVSLHALGQGH-LCGASLISPD 649

  Fly    70 FVLTVAHCKSTQTLF---------VRLGAYNINHPT----DQIRVIETIAHPQYSNSTYANDIAL 121
            ::::.|||...:|:|         ..||..:.:..:    .:.::...|.||.:::.|:..||||
  Rat   650 WLVSAAHCFQDETIFKYSDHTMWTAFLGLLDQSKRSASGVQEHKLKRIITHPSFNDFTFDYDIAL 714

  Fly   122 VKLERSVIFNLNIQPICIHLDAT----LGKQIRYYNAFGWGRTRNAEQSD-ILQRIFVNRTNPMI 181
            ::||:...::..::|||:. |.|    .||.|.   ..|||.|:...... |||:..:...|...
  Rat   715 LELEKPAEYSTVVRPICLP-DNTHVFPAGKAIW---VTGWGHTKEGGTGALILQKGEIRVINQTT 775

  Fly   182 CHLYLGMSPDPKQICATTDQG--DTCAGDSGGPLISKITYQGKNFDTQFGITSY--GTRECNGVG 242
            |...|.....|:.:|.....|  |:|.||||||| |.:...|:.|  |.|:.|:  |..:.|..|
  Rat   776 CEELLPQQITPRMMCVGFLSGGVDSCQGDSGGPL-SSVEKDGRIF--QAGVVSWGEGCAQRNKPG 837

  Fly   243 LYTDVSQYSGWI 254
            :||.:.:...||
  Rat   838 VYTRIPEVRDWI 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 69/243 (28%)
St14NP_446087.1 SEA 88..178 CDD:460188
CUB 214..332 CDD:238001
CUB 340..444 CDD:238001
LDLa 454..486 CDD:238060
LDLa 492..523 CDD:238060
LDLa 525..559 CDD:238060
LDLa 567..602 CDD:238060 4/8 (50%)
Tryp_SPc 615..852 CDD:238113 69/243 (28%)
Blue background indicates that the domain is not in the aligned region.

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