DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43110 and ovch2

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_031756362.1 Gene:ovch2 / 100496902 XenbaseID:XB-GENE-955935 Length:1023 Species:Xenopus tropicalis


Alignment Length:294 Identity:75/294 - (25%)
Similarity:124/294 - (42%) Gaps:68/294 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 CGKTP---------VPKIISGSNASQQSAQYMAGIFNTTHLLCGGTIIHEDFVLTVAHCKSTQTL 83
            ||::|         :.:|:.|..:.:....:...:.......|||.::....|||.:||...:.:
 Frog    47 CGESPLGSARDLNYLSRIVGGRESKKGQHPWTVSLKRNGKHFCGGILVSRRHVLTASHCLLDRNV 111

  Fly    84 --FVRL--GAYN--INHPTDQ-IRVIETIAHPQYSNSTYAN-DIALVKLERSVIFNLNIQPICI- 139
              ::|:  |.|:  |...|:| .:|||...||.::.:...| |:|::.|:.:|.|:.||||.|: 
 Frog   112 KSYIRVFFGEYDQTIKEDTEQTFKVIEIFKHPDFNYTQPMNYDVAVLVLDGAVTFDDNIQPACMP 176

  Fly   140 ---------HLDATLGKQIRYYNAFGWGR-TRNAEQSDILQRIFVNRTNPMIC----HLYLGMSP 190
                     .|..||          |||. |.|.....:||.:.:...|..||    ....|...
 Frog   177 NPDDVFEPGDLCVTL----------GWGHLTENGILPGVLQEVLLPLVNLSICLDVMATLKGAVV 231

  Fly   191 DPKQICATTDQG--DTCAGDSGGPLISKITYQGKNFDT--QFGITSYG--------------TRE 237
            ..|.:||...:|  |.|.|||||||:.:     :...|  ..|:||:|              ...
 Frog   232 SSKIVCAGFPEGGKDACQGDSGGPLLCQ-----RRHGTWVLHGLTSWGMGCGRSWKNNMFLPANR 291

  Fly   238 CNGVGLYTDVSQYSGWIA---NIVRSKQDRSVVS 268
            ....|::||:.:..||::   |...:|:.:...|
 Frog   292 KGSPGIFTDIQKLLGWVSFQLNTAVTKESKESCS 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 69/264 (26%)
ovch2XP_031756362.1 Tryp_SPc 64..309 CDD:238113 69/259 (27%)
CUB 330..436 CDD:238001
CUB 447..558 CDD:238001
Tryp_SPc 606..832 CDD:238113
CUB 888..1000 CDD:238001
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.