DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43110 and klkb1

DIOPT Version :10

Sequence 1:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_002934450.3 Gene:klkb1 / 100486524 XenbaseID:XB-GENE-985051 Length:629 Species:Xenopus tropicalis


Alignment Length:284 Identity:79/284 - (27%)
Similarity:127/284 - (44%) Gaps:61/284 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LCSLGSCQLAYSMFLKQPCGKTPVP---KIISGSNASQQSAQYMAGIFNTTHL---------LCG 62
            ||.:.|.         :.||: |:.   :|:.|:::......:...:    ||         .||
 Frog   372 LCKIKSV---------KGCGE-PIEHANRIVGGTDSVLGEWPWQVSM----HLRLTASYKKHACG 422

  Fly    63 GTIIHEDFVLTVAHCKSTQTL----FVRLGAYNINHPTDQIRVIET---IAHPQYSNSTYANDIA 120
            |:||...:::|.|||.:...|    .:..|...:::.|......||   |.||.|:.:....|||
 Frog   423 GSIISNQWIVTAAHCFAMHPLPQMWIIYSGVVKLSNITQSTPFSETEQIIIHPHYTGAGNGTDIA 487

  Fly   121 LVKLERSVIFNLNIQPICIHLDATLGKQIRYY--NA---FGWGRT-RNAEQSDILQRIFVNRTNP 179
            |:||:..:.||.:.:.||:.     .::..:.  |:   .|||.| .:...::|||:..|.:.:.
 Frog   488 LLKLKTPISFNDHQKAICLP-----PREPTFVLPNSCWITGWGFTEESGSLANILQKAEVPQIST 547

  Fly   180 MICH-LYLGMSPDPKQICATTDQG--DTCAGDSGGPL---ISKITYQGKNFDTQFGITSYGTREC 238
            ..|. .|.....|.|.:||...:|  |:|.|||||||   :.:|.|       ..||||:| ..|
 Frog   548 EECQGNYEQTRIDKKILCAGYKRGKIDSCKGDSGGPLACVVDEIWY-------LTGITSWG-EGC 604

  Fly   239 ---NGVGLYTDVSQYSGWIANIVR 259
               ...|:||.||:::.||....|
 Frog   605 ARPGKPGVYTRVSEFTDWIIEHTR 628

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 72/251 (29%)
klkb1XP_002934450.3 APPLE 21..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519