DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43125 and psh

DIOPT Version :10

Sequence 1:NP_001247344.1 Gene:CG43125 / 12798281 FlyBaseID:FBgn0262588 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:246 Identity:57/246 - (23%)
Similarity:97/246 - (39%) Gaps:83/246 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SNITCTGTLINERFVLTAASCI--DYQTELIVRLGEIDGTLQNSSKLQYEEIYVARALIHRSYSS 110
            ::..|.|:||..|||||||.|:  |..|...||||.::  ::|... .|::|.:....||..|  
  Fly   168 TDFRCGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVN--IENPDH-SYQDIVIRSVKIHPQY-- 227

  Fly   111 ESHQYN-IALLRLKTSVVYKKNIQPICIDVNVGKVPKAPTFEIEKKKNEEPKKNKAGIMKRFLNW 174
            ..::|| ||:|.|:..||...||:|.|:..:.               .:.|..:|         :
  Fly   228 VGNKYNDIAILELERDVVETDNIRPACLHTDA---------------TDPPSNSK---------F 268

  Fly   175 FLSLFGV----REPRPDVIL----------------PPQPIAV---------------------- 197
            |::.:||    ...|..::|                ..||.::                      
  Fly   269 FVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLIAD 333

  Fly   198 ------GWPLTKQIN-ESALFHQYGILS--HRNSESKKDVYTDVMAYVNWI 239
                  |.||..::| |..::...|::|  ...:.....:||.|.:|:::|
  Fly   334 ACKGDSGGPLIHELNVEDGMYTIMGVISSGFGCATVTPGLYTRVSSYLDFI 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43125NP_001247344.1 Tryp_SPc 37..>137 CDD:473915 35/91 (38%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 57/246 (23%)
Blue background indicates that the domain is not in the aligned region.

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