DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43120 and gprs

DIOPT Version :10

Sequence 1:NP_001246754.1 Gene:CG43120 / 12798252 FlyBaseID:FBgn0262580 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_725599.2 Gene:gprs / 36862 FlyBaseID:FBgn0024232 Length:1302 Species:Drosophila melanogaster


Alignment Length:141 Identity:30/141 - (21%)
Similarity:49/141 - (34%) Gaps:39/141 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FSDVCIRID--C---------ISFRCHKIILACASEFFERLFQEDSEEFLLDGTTPEVFQIFLDF 72
            |...||.:|  |         |.::|.|.::....||.:    |...|.|..|:...:.|..:..
  Fly   183 FVQCCINVDTVCALLASAERYIQYKCTKTLVQKVLEFVD----EHGTEVLNLGSFTLLPQHVVRL 243

  Fly    73 IYAPND---DQFGNLEPDVLMCLLKCANMWLAVEIEERCIDILLDLSPDMDPDALIALFA---VS 131
            |.|..:   |:|...:         .|.||...         ..|.:|::|...::..|.   ..
  Fly   244 ILAREELRADEFTKFQ---------AALMWSKK---------YYDNNPNIDIKEILGTFCEYIQF 290

  Fly   132 HCVDHKVLMEQ 142
            |.:...|||.:
  Fly   291 HKIPANVLMRE 301

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG43120NP_001246754.1 BTB_POZ_ZBTB_KLHL-like 19..99 CDD:349497 20/93 (22%)