DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43294 and obst-J

DIOPT Version :10

Sequence 1:NP_001356903.1 Gene:CG43294 / 12798218 FlyBaseID:FBgn0262986 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_649179.2 Gene:obst-J / 40202 FlyBaseID:FBgn0036940 Length:353 Species:Drosophila melanogaster


Alignment Length:198 Identity:37/198 - (18%)
Similarity:64/198 - (32%) Gaps:70/198 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLNKLPLIVLLCAVFSGFCMAQTV------------QRWPFPNDCHRYY--------ETRLLDCP 45
            |.|:|.:|.||.|:.:....|:..            |..|..:.|.|:|        ..:..:||
  Fly     1 MENRLLVIWLLLAIATALVKAELTDISAICRISDPWQMLPHKDHCQRFYVCTGDDDMPFQEFNCP 65

  Fly    46 PEFYWNSQLLQCNSQTPVGCSSIDPITNWNNSYPNSPPIKEPENSDLTKL--------------- 95
            .|::::.:|:.|   .|..|:.........||.       |...||.|:.               
  Fly    66 AEYHFSKKLMIC---VPGACTDESVFCGLTNSV-------ERVQSDCTRYRQCLEGGSFAVAKCS 120

  Fly    96 ------------------------CENKLNQLIPYPADCTKFIRC-DYLPFVMCCPQYLYWNSQL 135
                                    |....|..:..|:||..:.|| .....::.||...|::.::
  Fly   121 VGNYFDPARRACLPVAISAAHQCSCVLPDNATLANPSDCETYFRCHSGQAELVQCPSGDYFDERV 185

  Fly   136 LTC 138
            .:|
  Fly   186 SSC 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43294NP_001356903.1 ChtBD2 96..139 CDD:214696 11/44 (25%)
obst-JNP_649179.2 ChtBD2 <40..79 CDD:214696 9/41 (22%)
CBM_14 145..192 CDD:426342 11/44 (25%)
CBM_14 216..259 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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