DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43064 and CG14891

DIOPT Version :10

Sequence 1:NP_001246726.1 Gene:CG43064 / 12798207 FlyBaseID:FBgn0262366 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_650560.1 Gene:CG14891 / 42013 FlyBaseID:FBgn0038445 Length:495 Species:Drosophila melanogaster


Alignment Length:437 Identity:97/437 - (22%)
Similarity:174/437 - (39%) Gaps:106/437 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RSTCSAGPSTTHPSTTIFA----LNTYCWDMILSYLSLSEQLYLATSNHQLKMLFEALQHRYK-I 109
            :::.|..|:....|.|:.|    :....|..:|.||||:|:|..|.|..:.:.::|...||.. :
  Fly    93 QASTSWHPTPVEESGTLSAYDLPITDDIWWKVLDYLSLNERLNFAASCERFQAIYELDSHRINHV 157

  Fly   110 IGESDIGSIGEMELQKLLYIVGEHVISYE-SPLDPHSGH-DQHLWILRDYCPNLRHLKMSFRRPR 172
            :...|:.::....:::|:.:.|:|:.... .||.|:..: .:.:.:|...||||..|  ||    
  Fly   158 LNMKDVCTLTHRVIKRLMLLSGKHIHCVTGGPLHPNWPYLTEFVQLLGVSCPNLTEL--SF---- 216

  Fly   173 WNPLLKLKSLTSLHASLHFTDEGLYKDFIISLSDLPHLKKLKLEATSYTGDGLRALDKLEYLEIG 237
                                       |.||:| |.|:        ::..||...|..:..:.:.
  Fly   217 ---------------------------FKISVS-LAHM--------THLFDGANGLINITNISLR 245

  Fly   238 NQRGFDASILASCCMTMKKLCHLNMGENTANLEAEDFRVIVRRGKNLESLAFSLILLEGNVPYD- 301
            .....||.|.  |...:.||..|::.||        |.:   :|.:|:||..||.:|..:...| 
  Fly   246 RCNLKDAHIY--CLQMLSKLKSLDIREN--------FSI---KGDSLKSLPISLEILNVSGCVDL 297

  Fly   302 ---TVHQLPKLKHLQ--------LWYRDNKFISK--SFIEKLIQKPGTPLESLILMGNTLKLEEV 353
               .:.||..|.||:        .:.:||:...:  .:...|.....|...::|.:|...:|..:
  Fly   298 SPKCLIQLAALSHLRELRCPGIVKFAKDNELYGRLAHYCPMLEVLELTDFMNVIQLGGLSRLHTL 362

  Fly   354 DAICEISSLRELFVS--CKTDAARSFLRLKHLEILD--------------------VKMLYVSND 396
              :...|:..:..|:  ..|..|.|: .|:||||||                    ::.|.:.|.
  Fly   363 --VIHSSAQLDYHVNNVLLTSIAESY-SLRHLEILDSFGPMSDTSFDLSIFSQLKELRTLILHNQ 424

  Fly   397 ELLAL----LEECALLNVLSVRFAREITFEFVLK-ALSLYSHRKIKI 438
            ....|    |::.:.|..|.:..:..::.|.|.| ..||...|::|:
  Fly   425 NFTTLHLMGLQKLSTLEFLDLSGSPNLSNEVVAKLTKSLSGLRRLKV 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43064NP_001246726.1 LRR <198..480 CDD:443914 64/282 (23%)
CG14891NP_650560.1 RRM 41..92 CDD:214636
leucine-rich repeat 211..237 CDD:275381 12/67 (18%)
LRR <235..>463 CDD:443914 52/243 (21%)
leucine-rich repeat 239..262 CDD:275381 4/24 (17%)
leucine-rich repeat 263..285 CDD:275381 9/32 (28%)
leucine-rich repeat 286..338 CDD:275381 10/51 (20%)
leucine-rich repeat 339..387 CDD:275381 10/50 (20%)
leucine-rich repeat 388..415 CDD:275381 7/26 (27%)
leucine-rich repeat 416..439 CDD:275381 4/22 (18%)
leucine-rich repeat 440..465 CDD:275381 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.

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