DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43153 and CG5273

DIOPT Version :10

Sequence 1:NP_001245989.1 Gene:CG43153 / 12798157 FlyBaseID:FBgn0262683 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_569857.1 Gene:CG5273 / 31021 FlyBaseID:FBgn0040382 Length:469 Species:Drosophila melanogaster


Alignment Length:153 Identity:46/153 - (30%)
Similarity:71/153 - (46%) Gaps:32/153 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SILVMVIILQAQNIATGTPRGGSRSSSSSSRSSPRSSYG----SSYGSN---YGSTYGSGSRHSY 67
            ::..:::.....|:.......|::..:|||.||  |:||    .||.:|   .|:::...::.||
  Fly    18 ALFALLLTHGGDNVVDARRNQGNQRKTSSSSSS--SNYGHVTQPSYNTNGHAAGNSHADVAKLSY 80

  Fly    68 SPPSYS----------SLSKTFSLPTFDLGHNLPKGPPPAYSAHDTVGGAPTNIRERPPAYKPPR 122
              |:|:          |.....|.|  ..|.|:|:||||||||.:..|||..|:.|.||||..|.
  Fly    81 --PNYNSQPNRPMAAGSSGSPGSAP--QPGWNVPQGPPPAYSASNPAGGARPNMHEPPPAYHAPN 141

  Fly   123 ---------KQISSSLYHNQYQG 136
                     ....|:::..||.|
  Fly   142 YGAAPPNYGAATGSNVHQPQYSG 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43153NP_001245989.1 None
CG5273NP_569857.1 hnRNP-L_PTB <99..>155 CDD:273733 23/57 (40%)
DUF4813 166..388 CDD:435117
Blue background indicates that the domain is not in the aligned region.

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