DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43229 and swm-1

DIOPT Version :10

Sequence 1:NP_001245738.1 Gene:CG43229 / 12798152 FlyBaseID:FBgn0262874 Length:82 Species:Drosophila melanogaster
Sequence 2:NP_505346.1 Gene:swm-1 / 182893 WormBaseID:WBGene00023417 Length:135 Species:Caenorhabditis elegans


Alignment Length:76 Identity:21/76 - (27%)
Similarity:34/76 - (44%) Gaps:11/76 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLMVAAIRADLGGSGSCGPYECRLSNPICR--CESFC----QEFSQRCWKNPSGCHCARGYARN 70
            :|:::..|.|....:.:|...|..:|   |.  ||..|    :..:::|..|.  |.|..|:.||
 Worm     3 ILVIITCIVAVATATKTCEANEELVS---CHNTCEPQCGYTPKACTEQCIMNT--CDCKDGFVRN 62

  Fly    71 ERGHCVPLILC 81
            ..|.||.:..|
 Worm    63 SLGKCVEVSEC 73

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43229NP_001245738.1 None
swm-1NP_505346.1 TIL 20..73 CDD:460351 17/57 (30%)
TIL 80..133 CDD:410995
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.