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Protein Alignment HP1Lcsd and cbx3b
DIOPT Version :10
| Sequence 1: | NP_001246478.1 |
Gene: | HP1Lcsd / 12798145 |
FlyBaseID: | FBgn0263084 |
Length: | 83 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001373276.1 |
Gene: | cbx3b / 567497 |
ZFINID: | ZDB-GENE-070628-2 |
Length: | 194 |
Species: | Danio rerio |
| Alignment Length: | 37 |
Identity: | 19/37 - (51%) |
| Similarity: | 28/37 - (75%) |
Gaps: | 0/37 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 27 MFLIKFKDSPVVEVVPGIEANRRIPQMVIEFYMDHLS 63
|||||:|::..|.::..:||::|.|||||.||.|.|:
Zfish 151 MFLIKWKNTDEVALLAAVEASKRWPQMVIRFYEDKLT 187
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| HP1Lcsd | NP_001246478.1 |
CSD |
10..62 |
CDD:349275 |
18/34 (53%) |
| cbx3b | NP_001373276.1 |
CD_CSD |
20..68 |
CDD:475127 |
|
| Chromo_shadow |
137..188 |
CDD:460191 |
19/37 (51%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
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