DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP1Lcsd and CBX5

DIOPT Version :10

Sequence 1:NP_001246478.1 Gene:HP1Lcsd / 12798145 FlyBaseID:FBgn0263084 Length:83 Species:Drosophila melanogaster
Sequence 2:NP_036249.1 Gene:CBX5 / 23468 HGNCID:1555 Length:191 Species:Homo sapiens


Alignment Length:58 Identity:24/58 - (41%)
Similarity:36/58 - (62%) Gaps:1/58 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FVRGRMVEKIVYVFTTANKNTMFLIKFKDSPVVEVVPGIEANRRIPQMVIEFYMDHLS 63
            |.||...|||:.. |.:..:.|||:|:||:...::|...|||.:.||:||.||.:.|:
Human   117 FERGLEPEKIIGA-TDSCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLT 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1LcsdNP_001246478.1 CSD 10..62 CDD:349275 20/51 (39%)
CBX5NP_036249.1 CD_HP1alpha_Cbx5 19..68 CDD:349298
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..117 24/58 (41%)
CSD_HP1alpha_Cbx5 116..173 CDD:349302 23/56 (41%)
Blue background indicates that the domain is not in the aligned region.

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