DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43326 and Litaf

DIOPT Version :10

Sequence 1:NP_001246463.1 Gene:CG43326 / 12798140 FlyBaseID:FBgn0263031 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_064364.1 Gene:Litaf / 56722 MGIID:1929512 Length:161 Species:Mus musculus


Alignment Length:76 Identity:24/76 - (31%)
Similarity:34/76 - (44%) Gaps:13/76 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 QVRCPLCQQNSKTETVEMTGALGQLS----CLLSTLS-CCFPIFALTFVYSCLQSRLKSKRVFCS 110
            |:.||.|.:...|:.....|||..||    |||..:: |||..|       |:.: |:....:|.
Mouse    93 QMCCPSCSKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPF-------CVDA-LQDVDHYCP 149

  Fly   111 RCGGHLGFHWR 121
            .|...||.:.|
Mouse   150 NCKALLGTYKR 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43326NP_001246463.1 LITAF 49..121 CDD:197841 23/74 (31%)
LitafNP_064364.1 PPxY motif 20..23
zf-LITAF-like 89..159 CDD:463165 23/73 (32%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 111..134 10/22 (45%)
Blue background indicates that the domain is not in the aligned region.

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