DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43326 and CG30273

DIOPT Version :10

Sequence 1:NP_001246463.1 Gene:CG43326 / 12798140 FlyBaseID:FBgn0263031 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_726223.1 Gene:CG30273 / 246520 FlyBaseID:FBgn0050273 Length:128 Species:Drosophila melanogaster


Alignment Length:81 Identity:20/81 - (24%)
Similarity:30/81 - (37%) Gaps:16/81 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 IGPSSYQVRCPLCQQNSKTETVE-----MTGALGQLSCLLSTLSC-CFPIFALTFVYSCLQSRLK 103
            :||....:.||.|.....|. ||     .|..:..:.|::....| |.|..|.    ||:.:   
  Fly    55 VGPDPTFITCPHCHVQKLTR-VEYSPSVKTHCMAAILCIVGLWCCACLPYCAT----SCMNA--- 111

  Fly   104 SKRVFCSRCGGHLGFH 119
              ..||..|...:|.:
  Fly   112 --NHFCGNCNKFVGVY 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43326NP_001246463.1 LITAF 49..121 CDD:197841 18/77 (23%)
CG30273NP_726223.1 zf-LITAF-like 57..126 CDD:463165 19/79 (24%)

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