DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43088 and AT5G41980

DIOPT Version :10

Sequence 1:NP_001245670.1 Gene:CG43088 / 12797977 FlyBaseID:FBgn0262534 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_199013.1 Gene:AT5G41980 / 834203 AraportID:AT5G41980 Length:374 Species:Arabidopsis thaliana


Alignment Length:396 Identity:84/396 - (21%)
Similarity:136/396 - (34%) Gaps:100/396 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EKKMAYVIPIACFEARISGIPLSLRKSMHLKCNTCIFNI----SDQSFVKFYAIDKITFKKILKV 87
            :|:.|..:|     ..:|.|.:|       ..|..::.|    ::|.|..| .:||..|.|:..:
plant     8 DKEEAVTLP-----KEVSKISIS-------DGNKFVYQILNGPNEQCFENF-RMDKPVFYKLCDL 59

  Fly    88 VKPYVQVSALSHPIQL-----AAVFRYLVTGCSELAVAHDYRVRIESSMLAKILNRFIPLLQKLL 147
            ::..   ..|.|..::     .|:|.::        :.|:.|.|               .:|:|.
plant    60 LQTR---GLLRHTNRIKIEAQLAIFLFI--------IGHNLRTR---------------AVQELF 98

  Fly   148 CQA--TIS----------IQMSRQQMQISSKNFWEKYKLPKVVACLVGT----HIGIKKPAKDCS 196
            |.:  |||          |.:|:...|.:|.:...:...|....| ||.    ||.:.....:..
plant    99 CYSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDDPYFKDC-VGVVDSFHIPVMVGVDEQG 162

  Fly   197 DFLNKKGYYSLNVMLVCNDNMEIIASDATFPGSCRDSVIWNRSRARELLSVTLNGHFILANSKYS 261
            .|.|..|..:.||:...:.::......|.:.||..|..:.|.:..|........|.:.:.::||.
plant   163 PFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQGKYYIVDNKYP 227

  Fly   262 QESFVLTPYKNAEIGTYQHT---FNLRHAQARNMVEQTIEVLKNRFLCLQRGLKYEPSFCCMIVN 323
            .....:.||......:.:..   ||.||......:.:|...||.||..|.....|.......:|.
plant   228 NLPGFIAPYHGVSTNSREEAKEMFNERHKLLHRAIHRTFGALKERFPILLSAPPYPLQTQVKLVI 292

  Fly   324 VCCALHNL---------------------CGSQNLTITDEFQFE--GDDNGQRE---------RD 356
            ..|||||.                     .|.......:|.|.|  |.::|.|.         ||
plant   293 AACALHNYVRLEKPDDLVFRMFEEETLAEAGEDREVALEEEQVEIVGQEHGFRPEEVEDSLRLRD 357

  Fly   357 EIAQSL 362
            |||..|
plant   358 EIASEL 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43088NP_001245670.1 DDE_Tnp_4 181..330 CDD:463855 35/155 (23%)
AT5G41980NP_199013.1 DDE_Tnp_4 147..299 CDD:463855 33/151 (22%)

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