DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43088 and AT4G10890

DIOPT Version :10

Sequence 1:NP_001245670.1 Gene:CG43088 / 12797977 FlyBaseID:FBgn0262534 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_567367.1 Gene:AT4G10890 / 826688 AraportID:AT4G10890 Length:527 Species:Arabidopsis thaliana


Alignment Length:209 Identity:40/209 - (19%)
Similarity:74/209 - (35%) Gaps:61/209 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 IESSMLAKILNRFIPLLQKLLCQATISIQMSRQQMQISSKNFWEKYKLPKVVACLVGTHIGIKKP 191
            :|:..|.:.:..|:..:.|   ..|:...::|.|..::.    .|.|:..|::.|:         
plant    11 LENVYLEESVAMFLEEVDK---NRTVRDIVARYQQSLNV----VKRKIDDVLSALL--------- 59

  Fly   192 AKDCSDFLNKKGYYSLNVMLVCNDNMEIIASDATFPGSCRDSVIWNRSRARELLSVTLNGHFILA 256
             |..:|.|..:..:...|:..|..|    .|.:..|.                     |..:.|.
plant    60 -KFAADTLKSQESHDTKVLKYCARN----ESFSPHPS---------------------NRKYYLV 98

  Fly   257 NSKYSQESFVLTPYKN-----AEIG------TYQHTFNLRHAQARNMVEQTIEVLKNRFLCLQRG 310
            ||.|...:..|.|::.     .:.|      |.|..||.:|...|:::::|..|.|.::..|.. 
plant    99 NSVYPTTTGYLGPHRRILYHLGQFGRGGPPVTVQELFNRKHLDLRSVIDRTFGVWKAKWRILDH- 162

  Fly   311 LKYEPSFCCMIVNV 324
                   .|..||:
plant   163 -------TCKNVNI 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43088NP_001245670.1 DDE_Tnp_4 181..330 CDD:463855 30/155 (19%)
AT4G10890NP_567367.1 DDE_Tnp_4 <72..160 CDD:463855 22/112 (20%)
DUF2439 245..314 CDD:463065
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.