DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43088 and AT3G19120

DIOPT Version :10

Sequence 1:NP_001245670.1 Gene:CG43088 / 12797977 FlyBaseID:FBgn0262534 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_566626.1 Gene:AT3G19120 / 821446 AraportID:AT3G19120 Length:446 Species:Arabidopsis thaliana


Alignment Length:343 Identity:80/343 - (23%)
Similarity:147/343 - (42%) Gaps:60/343 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 ISDQSFVKFYAIDKITFKKILKVVKPYVQVSALSHPIQ--LAAVFRYLVTGCSELAVAHDYRVRI 127
            :.|..:...|.:....|..::..:||::..|.||.|..  :|.|...|..|||...:|..|  .:
plant   112 LRDARWRSLYGLSYPVFITVVDKLKPFITASNLSLPADYAVAMVLSRLAHGCSAKTLASRY--SL 174

  Fly   128 ESSMLAKILNRFIPLLQKLLCQATISIQMSRQQMQISSKNFWEKYKLPKVVACLVGTHIGIKKPA 192
            :..:::||.|....||...|....|.|.:.::::..:::.|.|...||.:...:..|.:.:::..
plant   175 DPYLISKITNMVTRLLATKLYPEFIKIPVGKRRLIETTQGFEELTSLPNICGAIDSTPVKLRRRT 239

  Fly   193 KDCSDFLNKKGYYSLN------VMLVCNDNMEI---IASDATFPGS------CRDSVIWNRSRAR 242
            |     ||.:..|...      ::.|..|:.:|   :...|  ||.      .|||:::.|..:.
plant   240 K-----LNPRNIYGCKYGYDAVLLQVVADHKKIFWDVCVKA--PGGEDDSSHFRDSLLYKRLTSG 297

  Fly   243 ELL---SVTLNGH----FILANSKYSQESFVLTPYKNAEIGT-YQHTFNLRHAQARNMVEQTIEV 299
            :::   .:.:.||    :|:.:..|...||::||:.....|| .::.|:....:.|::|.:.|.:
plant   298 DIVWEKVINIRGHHVRPYIVGDWCYPLLSFLMTPFSPNGSGTPPENLFDGMLMKGRSVVVEAIGL 362

  Fly   300 LKNRFLCLQR---GLKYEPSFCCMIVNVCCALHNLC-----------------GSQNLTITDEFQ 344
            ||.|:..||.   |:.:.|    ..:..||.|||||                 |:....:..|.|
plant   363 LKARWKILQSLNVGVNHAP----QTIVACCVLHNLCQIAREPEPEIWKDPDEAGTPARVLESERQ 423

  Fly   345 FEGDDNGQRERDEIAQSL 362
            |.  ..|:..|..:|:.|
plant   424 FY--YYGESLRQALAEDL 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43088NP_001245670.1 DDE_Tnp_4 181..330 CDD:463855 39/174 (22%)
AT3G19120NP_566626.1 DDE_Tnp_4 228..392 CDD:463855 39/174 (22%)

Return to query results.
Submit another query.