DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43088 and si:dkey-56d12.4

DIOPT Version :10

Sequence 1:NP_001245670.1 Gene:CG43088 / 12797977 FlyBaseID:FBgn0262534 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001103508.1 Gene:si:dkey-56d12.4 / 799220 ZFINID:ZDB-GENE-060531-147 Length:464 Species:Danio rerio


Alignment Length:256 Identity:56/256 - (21%)
Similarity:93/256 - (36%) Gaps:67/256 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 RVRIESSMLAKILN-----------RFIPLLQKLLCQATISIQMSRQQMQISSKNFWEKYKLPKV 177
            |..:..|:::|:::           .::|.|.|...|||:. |..|:|...::            
Zfish   239 RFAVSQSIVSKVISCWIDIMEENMRDYVPWLPKETIQATMP-QCFREQFPNTT------------ 290

  Fly   178 VACLVGTHIGIKKPAKDCSDF-------LNKKG-----YYSLNVM--LV----CNDNMEIIASDA 224
              |::           |||:.       |:.:|     ||..|.:  ||    |...|.|   ..
Zfish   291 --CII-----------DCSETPLQKPHNLDSRGESYSHYYGQNTIKYLVSIAPCGLIMFI---SP 339

  Fly   225 TFPGSCRDSVIWNRSRARELL----SVTLNGHFILANSKYSQESFVLTP---YKNAEIGTYQHTF 282
            .:.|.|.|..|...|...|.|    .|..:..|.:::..|.::..::.|   .|..::.....|.
Zfish   340 AYGGRCSDKFITANSGFLEYLRPGDEVMADRGFTISDLLYEKKVKLVIPAFTKKGMQLSEEDTTN 404

  Fly   283 NLRHAQARNMVEQTIEVLKN-RFLCLQRGLKYEPSFCCMIVNVCCALHNLCGSQNLTITDE 342
            ..|.|..|..||:.|..||. :.:.....:...|.. ..|:.:|.||.||.......:.||
Zfish   405 TRRIANVRVHVERVICRLKTFKIISQTVPINLTPKI-DKILRICAALCNLRSDIISDVEDE 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43088NP_001245670.1 DDE_Tnp_4 181..330 CDD:463855 39/174 (22%)
si:dkey-56d12.4NP_001103508.1 THAP 6..>79 CDD:461662
HTH_Tnp_4 218..260 CDD:463934 3/20 (15%)
DDE_Tnp_4 293..452 CDD:463855 39/173 (23%)
Blue background indicates that the domain is not in the aligned region.

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