DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43088 and LOC100487906

DIOPT Version :10

Sequence 1:NP_001245670.1 Gene:CG43088 / 12797977 FlyBaseID:FBgn0262534 Length:362 Species:Drosophila melanogaster
Sequence 2:XP_017948932.2 Gene:LOC100487906 / 100487906 XenbaseID:XB-GENE-29078971 Length:350 Species:Xenopus tropicalis


Alignment Length:338 Identity:71/338 - (21%)
Similarity:143/338 - (42%) Gaps:52/338 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 KCNTCIFNISDQSFVKFYAIDKITFKKILKVVKPYVQVS-----ALSHPIQLAAVFRYLVTGCSE 116
            :..|...|:.::..::.|.:.....:.:..:::..:|.|     ||...:::.|...:..:|..:
 Frog    25 RARTEFLNLPEEVIIQRYRLHPALIRDLCHLLEHDLQPSTGRSHALPVYVKVTAALDFYTSGTFQ 89

  Fly   117 LAVAHDYRVRIESSMLAKILNRFIPLLQKLLCQAT---ISIQMSRQQMQISSKNFWEKYKLPKVV 178
             ..|.|.....::||     :|.:..:.:.:.:..   |.....|.|.:.::::|...:..|..|
 Frog    90 -TPAGDAAGISQASM-----SRCVTQVTEAIVRRAHRFIRFPRGRIQRRAAARDFHRLHGFPGAV 148

  Fly   179 ACLVGTHIGIKKPAKDCSDFLNKKGYYSLNVMLVCNDNMEIIASDATFPGSCRDSVIWNRSRARE 243
            ..:..||:.:|.|:...|.:.|:..|:|:::..||:....:....|.:|||..:         .:
 Frog   149 GAVGCTHVALKPPSDHESRYRNRWRYHSMHMQAVCDARGALTHIVAEYPGSVSE---------ED 204

  Fly   244 LLSVTLNGH------------FILANSKYSQESFVLTPYKN----AEIGTYQHTFNLRHAQARNM 292
            :|..:..||            :::....|:|:.:::||.::    ||:     .:|..|..|.::
 Frog   205 ILVQSSLGHMFQNRGQDDDDAWLIGGRCYTQKPWLMTPIEDPQSPAEL-----QYNDSHTAALSV 264

  Fly   293 VEQTIEVLKNRFLCLQR---GLKYEPSFCCMIVNVCCALHNLCGSQNLTITDEFQFEGDD----- 349
            :......||:||.||.|   .|:|.|.....|...||.|||:..|..|.:..|.:.|..|     
 Frog   265 LSAAFGSLKSRFRCLSRRGGSLQYSPLKVSQIFVACCVLHNMALSHGLVVPVEERDEWSDVDAAE 329

  Fly   350 NGQRERDEIAQSL 362
            .|..|.:.:.|.|
 Frog   330 EGSEEAEHVRQEL 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43088NP_001245670.1 DDE_Tnp_4 181..330 CDD:463855 40/167 (24%)
LOC100487906XP_017948932.2 DDE_Tnp_4 151..305 CDD:463855 40/167 (24%)

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