Sequence 1: | NP_000079.2 | Gene: | COL1A1 / 1277 | HGNCID: | 2197 | Length: | 1464 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285150.1 | Gene: | Muc11A / 32174 | FlyBaseID: | FBgn0052656 | Length: | 1552 | Species: | Drosophila melanogaster |
Alignment Length: | 1691 | Identity: | 460/1691 - (27%) |
---|---|---|---|
Similarity: | 573/1691 - (33%) | Gaps: | 500/1691 - (29%) |
- Green bases have known domain annotations that are detailed below.
Human 8 RLLLLLAATALLTHGQEEGQVEGQDEDIPPITCVQNGLRYH----DRDVWKPEPCRI---CVCDN 65
Human 66 GKVLC---------------------DDVICDE-----------------TKNCPGAEVPEGECC 92
Human 93 PV--------------------------------------------CPDGSESPTDQETT----- 108
Human 109 ---------GVEGPKGDTGPRGP-RGPAGPPGRDGIPGQ--PGLPGPPGPPGPPGPPGLGGNFAP 161
Human 162 QLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPP 226
Human 227 GKNGDDGEAGKPGRPGERGPPGPQGARGLPG--TAGLPGMKGHRGFSGLDGAKGDAGPA-GPKGE 288
Human 289 PGSP--GENGAPGQMGPRGLPGE--RGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAV 349
Human 350 GAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNP-----GADGQPGAKGANGAPG--IAG 407
Human 408 APGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGAR 472
Human 473 GEP--GPTGLPGPPGE--RGGPGSRGFPGADGVAGPKGPAGERGSPGPAGP----KGSPGEAGRP 529
Human 530 GEAGLPG--AKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPG--PKGAAG 590
Human 591 EPGKAGERGVPGPPGAVGPAGKDGEAGAQGPP------GPAGPAGERGEQGPAGSPGFQGLPGPA 649
Human 650 GPPGEAGKPGEQGVPGDL--GAPG--PSGARGERGFPGERGVQGPPGPAG-PRGANGAPGNDGAK 709
Human 710 GDAGAPGAP--GSQGAPG--------LQGMPGERGAAGLPGPKGDRGDAGPKG-ADGSPGKDGVR 763
Human 764 GLTGPIGPPGPA-------GAPGDKGESGPSGPA-GPTGARGAPGDRGEPGPPGPA-GFAGPPG- 818
Human 819 -ADGQPGAKGEPGDA-----GAKGDAGPPGPAGP-----AGPPGPI-GNVGAPGAKGARGSAGPP 871
Human 872 GA-----TGFPGAA--GRVGPPG--PSGNAGPPGPPGPAGKEGGKGPR-GETGPAGRPGEVGPPG 926
Human 927 PPGPA-GEKGSPG--ADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLP--GPSGEPGKQG 986
Human 987 ----------PSGASGERGPPGPM--GPPGLAGPPGESGREGAPGAEGSPGRDGSPG-----AKG 1034
Human 1035 DRGETG-PAGPPGAP--------GAP--------GAPG----PVG--------PAG----KSGDR 1066
Human 1067 GETGPAG---PAG--------PVG--PVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQG 1118
Human 1119 PPGPPGSPGEQ--GPSGASGPAGPRGP--PGSAGA--------------------PGKDG----- 1154
Human 1155 ---LNGLPGPIGPPGP---------------RGRTGDAGPVGPPGP-----PGPPGPPGPPSAGF 1196
Human 1197 DFSFLPQPPQEKAHDGGRYYRADDANV-VRDRDLEVDTTLKSLSQQIEN------IRSPEGSRKN 1254
Human 1255 PA---------------------RTCRDLKMCHSDWKSGEYWIDPNQGCN-----------LDAI 1287
Human 1288 KVFCNMETGETC----VYPTQPSVAQKNWYISKNPKDKRHVWFGESMTDGFQFEYGGQGSDPADV 1348
Human 1349 A 1349 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
COL1A1 | NP_000079.2 | VWC | 40..95 | CDD:278520 | 20/143 (14%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 98..1214 | 397/1332 (30%) | |||
Nonhelical region (N-terminal) | 162..178 | 3/15 (20%) | |||
Triple-helical region | 179..1192 | 366/1212 (30%) | |||
Collagen | 239..295 | CDD:396114 | 16/60 (27%) | ||
Collagen | 275..324 | CDD:396114 | 15/53 (28%) | ||
PRK07764 | <449..640 | CDD:236090 | 66/208 (32%) | ||
Collagen | 500..556 | CDD:396114 | 20/61 (33%) | ||
Collagen | 686..741 | CDD:396114 | 23/65 (35%) | ||
Collagen | 719..766 | CDD:396114 | 18/55 (33%) | ||
Cell attachment site. /evidence=ECO:0000255 | 745..747 | 0/1 (0%) | |||
PRK12678 | 908..>1111 | CDD:237171 | 83/271 (31%) | ||
Cell attachment site. /evidence=ECO:0000255 | 1093..1095 | 0/1 (0%) | |||
Nonhelical region (C-terminal) | 1193..1218 | 4/24 (17%) | |||
COLFI | 1227..1463 | CDD:396131 | 30/165 (18%) | ||
Muc11A | NP_001285150.1 | PRK07764 | <366..816 | CDD:236090 | 165/508 (32%) |
PRK07764 | <696..1109 | CDD:236090 | 143/425 (34%) | ||
CBM_14 | 1495..1547 | CDD:279884 | 11/53 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |