DRSC/TRiP Functional Genomics Resources

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Protein Alignment AgaP_AGAP003666 and RKR1

DIOPT Version :9

Sequence 1:XP_313450.5 Gene:AgaP_AGAP003666 / 1274343 VectorBaseID:AGAP003666 Length:863 Species:Anopheles gambiae
Sequence 2:NP_013975.1 Gene:RKR1 / 855289 SGDID:S000004861 Length:1562 Species:Saccharomyces cerevisiae


Alignment Length:92 Identity:24/92 - (26%)
Similarity:36/92 - (39%) Gaps:24/92 - (26%)


- Green bases have known domain annotations that are detailed below.


Mosquito   547 WVVFMKRRTAVHKISSLPEATTAQLQQFD----------DVCAICY-------QDMTSAKITRCN 594
            |::     :..|.|:.:..:....|:.|.          :.|||||       :.:.|.....|.
Yeast  1472 WIM-----STQHVITGMNGSVLDSLELFTKNVHLQFSGFEECAICYSILHAVDRKLPSKTCPTCK 1531

Mosquito   595 HYFHGVCLRKWLYV--QDRCPLCHEII 619
            :.|||.||.||...  .:.||||...|
Yeast  1532 NKFHGACLYKWFRSSGNNTCPLCRSEI 1558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AgaP_AGAP003666XP_313450.5 TRC8_N 9..547 CDD:290425 24/92 (26%)
zf-rbx1 <575..616 CDD:289448 17/59 (29%)
zf-RING_2 576..616 CDD:290367 17/48 (35%)
RKR1NP_013975.1 COG5219 1..1561 CDD:227544 24/92 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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