DRSC/TRiP Functional Genomics Resources

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Protein Alignment AgaP_AGAP003666 and YBR062C

DIOPT Version :9

Sequence 1:XP_313450.5 Gene:AgaP_AGAP003666 / 1274343 VectorBaseID:AGAP003666 Length:863 Species:Anopheles gambiae
Sequence 2:NP_009618.2 Gene:YBR062C / 852354 SGDID:S000000266 Length:180 Species:Saccharomyces cerevisiae


Alignment Length:66 Identity:21/66 - (31%)
Similarity:32/66 - (48%) Gaps:7/66 - (10%)


- Green bases have known domain annotations that are detailed below.


Mosquito   561 SSLPEATTAQLQQFDDVCAICYQDMTS------AKITRCNHYFHGVCLRKWLYVQDRCPLCHEII 619
            :|||.....:|:..|: |:|||.:...      .::..|:|.|...||..||.....||||.:.:
Yeast    93 ASLPRINKKKLKATDN-CSICYTNYLEDEYPLVVELPHCHHKFDLECLSVWLSRSTTCPLCRDNV 156

Mosquito   620 M 620
            |
Yeast   157 M 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AgaP_AGAP003666XP_313450.5 TRC8_N 9..547 CDD:290425
zf-rbx1 <575..616 CDD:289448 15/46 (33%)
zf-RING_2 576..616 CDD:290367 14/45 (31%)
YBR062CNP_009618.2 RING_Ubox 109..153 CDD:418438 14/43 (33%)
RING-H2 finger (C3H2C3-type) 109..152 CDD:319361 13/42 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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